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GT18871

CSHL Arabidopsis genetrap mutant lines

Original: GT18871

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18871

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT18871 - 3-prime edge 
    GACGTTACCG ACCGTTTTCA TCCCTACATA CACATTCTAC CCGACCGGAT 
    CGAATCGGTA TATTCATCTC GCTCGACTAC AGGTCGTTTT CGTTACCGGT 
    ATATCCCGTT TTCGTTGCCG TCCCGCAAGT TAAATATGAA AATGAAAACG 
    GCAGGGGAAC TTTACCGACC GTTACCGACC GTTTTCATCC CTACATACAC 
    ATTCTACCCG ACCGGATCGT ATCGGTATAT TCATCTCACT CGAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23108657 [Map]; Strand: w
      • AT5G57100.1 - [+] show detail - Nucleotide/sugar transporter family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT18871 - 5-prime edge 
    CCCTGGGGGT ACTGAACTAC TGATGTTGTT GGTTTCTGAG ATTAAGATTA 
    GGGAGAAGAA GAAAGGAACA AAAAGAGAGA ACACGTGGCG GAGATAACGG 
    GAAGATGGAG ATTGAAGAGA GTATTATTTT GGTGATTTGA GCAAATCACG 
    GTTTCTTCAC CGACCATTAA AAAAAACACA GAGGTAGTGA GTGTCTGGCT 
    CTGTCACTTG AAAAGGAGAG GGAATGAGTA AACCAAACAC TTTAGTAGTC 
    TCTAGACTCT ACTGTCTCTT CTTCTTGCTT TCACGCGTGA ATTTTTTACC 
    TATTTTATTT TTTCCGCGTT CTTTATTTTC AAAATAAAAT TATAGAATGG 
    GATAAACATT ACATTAATTA ACTATTCAAC CGAGAAAAAG AAAAGAATAT 
    AATAATATCA GTCGACAGAA AAACAAAGGA AAGCTCTTTT GGCTTTTCAT 
    CGAGTGATTT CCGTATCCGA TAATGAATAT ATGACGTGGC CAAACCTGTC 
    TGACACGTAG GACCTATTTA CGGTTTCTGT TAACCAGTTG TTCACAGTCT 
    GTTCGATGTT TGTGTGGAAT TGATTGATGT CTCCTTACAT TCCAGATTCA 
    TATGCGGGGT GTTGAATTGT TCGACATTAA AAATGGTTTC

AT5G57100.1

Model type
Protein coding
Short Description
Nucleotide/sugar transporter family protein
Computational Description
Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT5G55950.1); Has 2192 Blast hits to 2189 proteins in 223 species: Archae - 0; Bacteria - 8; Metazoa - 527; Fungi - 398; Plants - 1015; Viruses - 0; Other Eukaryotes - 244 (source: NCBI BLink).
Link
InterPro Scan - TAIR