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GT18872

CSHL Arabidopsis genetrap mutant lines

Original: GT18872

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18872

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17907160 [Map]; Strand: w
      • AT4G38180.1 - [+] show detail - FAR1-related sequence 5
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT18872 - 5-prime edge 
    CATTGTATGG GGCAGACCCG CCCAAACGAT ACTTCAGACT TCTATAACTA 
    TGTTTTAGAG CAAGAAATTT GATTGCTATT ATATCAAAAA GAAAAC

AT4G38180.1

Model type
Protein coding
Short Description
FAR1-related sequence 5
Computational Description
FAR1-related sequence 5 (FRS5); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 3 (TAIR:AT2G27110.2); Has 1793 Blast hits to 1580 proteins in 47 species: Archae - 2; Bacteria - 0; Metazoa - 4; Fungi - 136; Plants - 1646; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR