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GT18875

CSHL Arabidopsis genetrap mutant lines

Original: GT18875

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18875

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17944794 [Map]; Strand: c
      • AT4G38300.1 - [+] show detail - glycosyl hydrolase family 10 protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT18875 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAGATGTATT 
    CGTCAACCGT TGACTTCTCG TCGCTGCAAG TCTCCACCAC GTTGAAATCA 
    TTGAAGAACA GAGTCGCCAA CGAGTCAATC TCACGAGCCG CGGCGAAGAA 
    CCCGTACGAC GTTCTTCCCC AGTCTGCTCT CGTAGAAGTC GAAGTGAAGC 
    ATCTCGTTGC TCACGTCCCA ATGCACGAAC TCTCCTCTGT ACCGAGTCAT 
    TAGACTCTTG ATTCGCCGGT TAACCGCCGA CCGGAGATCT TCGCCGGTTA 
    GATTACGAAC CCAGTCGGGA TTGTATTTGG GATCCTCCCA GAATATGTTG 
    TGGCCGCGAG CGATGATTCT GTTAGCTCTG ACGAGATTCA TCATCTTATC 
    AGCCAATGTG TAGTTGAGTT TGCCTTGATC GG

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17944723 [Map]; Strand: c
      • AT4G38300.1 - [+] show detail - glycosyl hydrolase family 10 protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT18875 - 5-prime edge 
    CTTTCATCCT CGCCAGGGTG AGGGAACTCC AACGGTACGA CGGCATAAGG 
    ATGGACGGAA TCGGTCTCGA GGGTCACTTC ACGACGCCAA ACGTAGCGCT 
    GATGAGAGCC ATCCTCGATA AACTCGCTAC GCTCCAGCTC CCAATCTGGC 
    TCACCGAGAT TGATATCAGC AGCAGCCTCG ACCACCGCTC TCAGGTTCAC 
    AAGTCTCTGT TTTCCGGTTT AGTTCAGTTT GCAATTTGAA TCTGGTTTTG 
    GTTACAATTT TTAGCCGGTT TATTAACGGT TTTTCGAATT GATTTTGGCT 
    GAAATACGGT ATGTCCGTTA GGATGATAAA ATACATTCTC TTGGCTCTTT 
    CGAATTGATT TCTCTTCCAA GTTGTACCTC TGTGTCGTCT CCTTTTTTGT 
    GGCCGAGCTT TTTGTTTTCA CAGATGGGTT TTATGGGTTT ACATTGGTTT 
    GAAATTCAAA TTGATCTCGG TTCGGTTTAC TTTGGTTTAG AGAAGAAAAC 
    CCAAAAAATA AGACACGCGA TGGATTTTTG AGAATGAGGT GCGTGGATCC 
    TAAAAGGAAT GATTTTTGTG GATTAACCCC TTTAGAACTC GTAGGCACGC 
    GCTCAACGCG ACATGGGGTG AGAGTGGCTG TGAAATGGCA CGATTGGTAA 
    AAGTGGGGGT ATGAAAGTGG AGCTCTCTCA TTGGCTAAAA AAATAAAATA 
    GTATGGGAGC TCGTCCTCTC ATATATTGAA AAAATAATAA ACAGTGTATC 
    TCTCATCTAA AAATATGAAT CCTTCAGCT

AT4G38300.1

Model type
Protein coding
Short Description
glycosyl hydrolase family 10 protein
Computational Description
glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G38650.1); Has 1908 Blast hits to 1902 proteins in 430 species: Archae - 10; Bacteria - 1128; Metazoa - 20; Fungi - 351; Plants - 265; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).
Link
InterPro Scan - TAIR