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Mutant Lines
GT18899

GT18899

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT18899

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 106447 [Map]; Strand: c
- AT4G00240.1 - [+] show detail - phospholipase D beta 2
  Distance: 0; Region: exon10 (CDS)

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACCTCCG ACATCAGGGA 
ACTCCTCACT TCCTGGAAGT GGTCGGACTT TGCCTTTCCG ATCAACTTCC 
ACCGGATATT TCATCAGATG TCCTCTCATC TCCGACACTT CCTCACTCCT 
AAACTGTTCC CAGTTCTCCT CCGCCACTGT TCTCACTTTC CTTACACACT 
CTAGACTCTC TGGATCCACA AAGCAATCAT CTAGCAGTGC CATGTGTTCT 
GCCCAAAGCG ACATTCTATA TCCGTAGATC TGCAGATTAT GTACC

AT4G00240.1

Model type: Protein coding
Short Description: phospholipase D beta 2
Curator Summary: member of C2-PLD subfamily
Computational Description: phospholipase D beta 2 (PLDBETA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D, plant (InterPro:IPR011402), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D/Transphosphatidylase (InterPro:IPR001736); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2407 Blast hits to 1935 proteins in 427 species: Archae - 0; Bacteria - 522; Metazoa - 526; Fungi - 534; Plants - 642; Viruses - 3; Other Eukaryotes - 180 (source: NCBI BLink).
Link: InterPro Scan - TAIR