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GT18911

CSHL Arabidopsis genetrap mutant lines

Original: GT18911

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18911

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4006735 [Map]; Strand: c
      • AT3G12610.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18911 - 5-prime edge 
    CCTACTTTCT CCCTGGACAT TTGGATATTA GCATAACAAG CTTTGTGGGC 
    GTATTCCAAC GGGTTTTCCT TTTGATCACC TTGAAGCTAC GTCGTTTAGT 
    GACAACCAAT GTCTCTGCGG TGGCCCTTTG ACGACGTCAT GTTAATAACA 
    AGGATATGGT TTCTGGTTTT ACTGAACCGG GTTATTCTTG TTGCTGTTGC 
    TCTTGTTCGT TGTATCAAAC TTGTGATATT TTGC

AT3G12610.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Curator Summary
Plays role in DNA-damage repair/toleration. Partially complements RecA- phenotypes.
Computational Description
DNA-DAMAGE REPAIR/TOLERATION 100 (DRT100); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G20820.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink).
Link
InterPro Scan - TAIR