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GT18913

CSHL Arabidopsis genetrap mutant lines

Original: GT18913

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18913

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30352928 [Map]; Strand: c
      • AT1G80760.1 - [+] show detail - NOD26-like intrinsic protein 6;1
        Distance: -720; Region: promoter
    Flanking Genome Sequence: GT18913 - 5-prime edge
    GCAATAAATT AGTGTTTTAA TTTTGATTCT AAAGAGTTAT AGATAGAAAA 
    GGAATAACGT TAAAAGTATA CAAATTATAT GCAAGAGTCA TTCGAAAGAA
    TTAAATAAAG AGATGAACTC AAAAGTGATT TTAAATTTTA ATGATAAGAA
    TATACATCTC ACAGAAATCT TTTATTTGAC ATGTAAAATC TTGTTTTCAC
    CTATCTTTTG TTAGTAAACA AGAATATTTA ATTTGAGCCT CACTTGGAAC
    GTGATAATAA TATACATCTT ATCATGATTG CATATTTTGC GGATAGTTTT
    TGCATGGGGA GATTAAAGGC TTAATCAAGC CTTGAATTTC CGAGGGGAGG
    AATCATGTTT TATACTTGCA AACTATACAA CCATCTGCAT CGATAATTGG
    TGTTAATACA TGCAAGGATT ATACACTAAA ACAAATCATT TATGTCCTTA
    CAAAAAGAGA GTCGACTGTG AGTCACATTC TGTGACAAGG AAAGGTCAAG
    AACCATCGCT TTTATCATCA TTCTCTTTGC TAACAACTTA CAACCACACA
    AACGCAAGAG TTCCATTCTC ATGGAGAAGA ACATATTATG CAAAATAATG
    TATGTCGATC GATAGAGAAA ACGATCCACA ATTATT

AT1G80760.1

Model type
Protein coding
Short Description
NOD26-like intrinsic protein 6;1
Curator Summary
Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.
Computational Description
NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink).
Link
InterPro Scan - TAIR