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GT18945

CSHL Arabidopsis genetrap mutant lines

Original: GT18945

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18945

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 133565 [Map]; Strand: c
      • AT2G01250.1 - [+] show detail - Ribosomal protein L30/L7 family protein
        Distance: 0; Region: intron4 (CDS)
      • AT2G01250.2 - [+] show detail - Ribosomal protein L30/L7 family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: GT18945 - 3-prime edge 
    CTTCGTTTCC GTCCCGCAAG TTAAATATGA AAATGAAAAC GGTAGAGGTA 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATACACA CATTCTACCC 
    GACCGGATCG TATCGGTATA TTCTTCTCAC TCGACCAGGG CGAAGATTCC 
    AACTTTCAAG ACCTAACCTA AGACTACTGA CCACATTGTA ATGAAACAAC 
    CTAGCAGTTT ATGCCAATTC ATCAAAAGAC TAATCTACAC AAACACAATA 
    ATACACGAAC CTGTCTCAAA CGCAAGAGCT GGAGAATCTT CTTAGTCTTA 
    GGGTCAATGG CATTGATACT GCAATATTAA AAAGAACAAC AGATAAGACA 
    ACAACCTGGA CACTGGCTTT GGAAATGCTT ATAAGACAAA CAACAACCGT 
    TTAACATACC CACGGATACG GATGATGAAC AAGAGCTTAG C

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 133566 [Map]; Strand: c
      • AT2G01250.1 - [+] show detail - Ribosomal protein L30/L7 family protein
        Distance: 0; Region: intron4 (CDS)
      • AT2G01250.2 - [+] show detail - Ribosomal protein L30/L7 family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: GT18945 - 3-prime edge 
    TTCGTTTCCG TCCCGCAAGT TAAATATGAA AATGAAAACG GTAGAAGTAT 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTATACACAC ATTCTACCCG 
    ACCGGATCGT ATCGGTATAT TCATTTCACT CGACACAGGG AAAGATTCCA 
    ACTTTCAAGA CCTAACCTAA GACTAATGAC AACATTGTAT TGAAACAACC 
    TAGCAGTTTA TGCCAATTCA TCAAAAGACT AATCTACACA AACACAATAA 
    TACACGAACC TGTCTCAAAC GCAAGAGCTG GAGAATCTTC TTAGTCTTAG 
    GGTCAATGGC ATTGATACTG CAATATTAAA AAGAACAACA GATAAGACAA 
    CAACATAGAC ACTGGCTTTA GAAATGCTTA TAAGACAAAC AACAACAGTA 
    TAACATACCC ACGGATACGG ATGATGAACA AGAGCTTAGC TTCAGGGTCA 
    ACATAGAAAC CTCCCTTAAG CTTGGCCTCG CGTTTCAACG AGATCAACTC 
    CTTCTCCTAT CAAGGATAAA AGAGAAGATC AACTACAGTT TCCAAGTATT 
    TGTATTTGGA GGATAAAAAT GTTTACCTTC TCGGCATATT CCTTGGAGTA 
    TTGCTCGGCT CTTTTGAAGA TAAGCTTCCT GTTCTCGGGG TTCTTCTTCT 
    TGGGCGGCT

AT2G01250.1

Model type
Protein coding
Short Description
Ribosomal protein L30/L7 family protein
Computational Description
Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1297 Blast hits to 1295 proteins in 388 species: Archae - 210; Bacteria - 1; Metazoa - 453; Fungi - 213; Plants - 195; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01250.2

Model type
Protein coding
Short Description
Ribosomal protein L30/L7 family protein
Computational Description
Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, chloroplast, plasma membrane, large ribosomal subunit, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1075 Blast hits to 1075 proteins in 310 species: Archae - 55; Bacteria - 0; Metazoa - 442; Fungi - 204; Plants - 182; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink).
Link
InterPro Scan - TAIR