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Mutant Lines
GT18954

GT18954

CSHL Arabidopsis genetrap mutant lines

Original: GT18954

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18954

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 5619629 [Map]; Strand: c
- AT3G16520.2 - [+] show detail - UDP-glucosyl transferase 88A1
  Distance: 0; Region: exon2 (CDS)
- AT3G16520.1 - [+] show detail - UDP-glucosyl transferase 88A1
  Distance: 0; Region: exon2 (CDS)
- AT3G16520.3 - [+] show detail - UDP-glucosyl transferase 88A1
  Distance: 0; Region: exon2 (CDS)

GTAAAGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAACCATAGG 
TACGCCTATT ATAATAAACA AATTGAATTC ACCACAATGA ACAGTTTAAG 
CATATATATA ATTGAAAATG TGTATAGATA TACTTAATTT ACCTGCACAA 
ACAGCTTCAA GAATTGAATT CCAACCGCAA TGAGTGACGA ATCCGCCGAC 
GGCTTTATGA TTTAGAACCG GAACTTGCGG AGCCCATGAT TCGACGACCA 
TTCCTCTGTT TTCGGTTCGG CTTAAGAATC CTTCTGGTAA GAGTGATTTC 
AAATCCAGTT CTGTCTTTTC TAACTCGGGT GGATTACGGA CCACCCACAA 
GAATCTCTGC CCACTTTTCT CTAAACCAAC AGCGATCTCA ATCAACTGTT 
CTTTTGAGAA CAAACCTAAG CTTCCAAAAC AGAGAAACAC AACACTCTTT 
TCCGGCTGCG AATCCAGCCA ATCCAGACAA GAAACTGTCT TGTTATCGT

3 prime edge [+] show sequence

Chromosome: 3; Position: 5619637 [Map]; Strand: c
- AT3G16520.2 - [+] show detail - UDP-glucosyl transferase 88A1
  Distance: 0; Region: intron1 (CDS)
- AT3G16520.1 - [+] show detail - UDP-glucosyl transferase 88A1
  Distance: 0; Region: intron1 (CDS)
- AT3G16520.3 - [+] show detail - UDP-glucosyl transferase 88A1
  Distance: 0; Region: intron1 (CDS)

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAACCATA GGTACGCCTA 
TTATAATAAA CAAATTGAAT TCACCACAAT GAACAGTATT AAGCATATAT 
ATAATTGAAA ATGTGTATAG ATATACTTAA TTTACCTGCA CAAACAGCTT 
CAAGAATTGA ATTCCAACCG CAATGAGTGA CGAATCCGCC GACGGCTTTA 
TGATTTAGAA CCGGAACTTG CGGAGCCCAT GATTCGACGA CCATTCCTCT 
GTTTTCGGTT CGGCTTAAGA ATCCTTCTGG TAAGAGTGAT TTCAAATCCA 
GTTCTGTCTT TTCTAACTCG GGTGGATTAC GGACCACCCA CAAGAATCTC 
TGCCCACTTT TCTCTAAACC AACAGCGATC TCAATCAACT GTTCTTTTGA 
GAACAAACCT AAGCTTCCAA AACAGAGAAA CACAACACTC TTTTCCGGCT 
GCGAATCCAG CCAATCCAGA CAAGAAACTG TCTTGTTAT

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 5619517 [Map]; Strand: c
  - AT3G16520.2 - [+] show detail - UDP-glucosyl transferase 88A1
    Distance: 0; Region: exon2 (CDS)
  - AT3G16520.1 - [+] show detail - UDP-glucosyl transferase 88A1
    Distance: 0; Region: exon2 (CDS)
  - AT3G16520.3 - [+] show detail - UDP-glucosyl transferase 88A1
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: GT18954 - 5-prime edge
```
TTTAATAGAG TGATGATTGT GGATGAGATC AAGATTGCTA TTTCGATGAA 
TGAATCAGAG ACTGGTTTCG TGAGCTCTTC GGAGGTGGAG AAACGAGTCC 
AAGAGATAAT TGGGGAGTGT CCGGTTAGGG AGAGA
```

AT3G16520.1

Model type: Protein coding
Short Description: UDP-glucosyl transferase 88A1
Computational Description: UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7498 Blast hits to 7448 proteins in 453 species: Archae - 0; Bacteria - 251; Metazoa - 2053; Fungi - 26; Plants - 4988; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G16520.2

Model type: Protein coding
Short Description: UDP-glucosyl transferase 88A1
Computational Description: UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7478 Blast hits to 7428 proteins in 453 species: Archae - 0; Bacteria - 251; Metazoa - 2051; Fungi - 26; Plants - 4970; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G16520.3

Model type: Protein coding
Short Description: UDP-glucosyl transferase 88A1
Computational Description: UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7523 Blast hits to 7470 proteins in 455 species: Archae - 0; Bacteria - 255; Metazoa - 2062; Fungi - 26; Plants - 5000; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink).
Link: InterPro Scan - TAIR