1. Home
  2. Mutant Lines
  3. GT18964

GT18964

CSHL Arabidopsis genetrap mutant lines

Original: GT18964

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18964

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23197966 [Map]; Strand: w
      • AT3G62710.1 - [+] show detail - Glycosyl hydrolase family protein
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: GT18964 - 5-prime edge 
    TACTTTCTCT CTGTCGACGA CTGCAAGAGC ATCGAGCATA TCAATGTAAG 
    GTTCGATCAC GAGCGGACGT CCAGTGACTA GGATCACTAG ACACTTCATC 
    CCACTACCAC ACGTGTGGCT GAGCGTGTCT GGACCTGGCT TGGTTATACC 
    CAGCGTGGGG CTGTCCCCAA ATGTCTCTGC GTAAGGGGTT TCTCCGACGA 
    CCACAATTGT GTATGCTGCG TCGGCGTGAA GCTTCGCTGT ATCTTGGTTT 
    GGTTCATCNT CACTCGACCA CATCAGNAGT GGGATCTACT GCTTTCTGGA 
    TGGCTTCCAA TATGGTGGTT CCTACATATA TATGTTTCGA AATAACATTT 
    TAGAACGAAT ATGTCAATAT AGTTAAACCT TGAATATAAT TGGAAAGATC 
    CGGGCCACCA TCAAGTTTGG AAAGATTTAA TGTGTATTTG ATTCCATCAA 
    GGTTTTTTTT GGAAAGATCC GGGAAACCAA GATATTATAA TGCATGCATG 
    TGTGACGGAT TAAATATTCT CTGACATTCT AAATTACCTT TTATTTTACC 
    GGAAGGGAGT CCATGTTTCG AGATAGTGGG AATATCTTCA CCGGTTCCGT 
    TAAATCCTTG CCAAGTGAGA CTAAAGC

AT3G62710.1

Model type
Protein coding
Short Description
Glycosyl hydrolase family protein
Computational Description
Glycosyl hydrolase family protein; FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20950.2); Has 10899 Blast hits to 10226 proteins in 1653 species: Archae - 71; Bacteria - 6941; Metazoa - 14; Fungi - 1479; Plants - 475; Viruses - 0; Other Eukaryotes - 1919 (source: NCBI BLink).
Link
InterPro Scan - TAIR