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Mutant Lines
GT18993

GT18993

CSHL Arabidopsis genetrap mutant lines

Original: GT18993

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18993

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 23352178 [Map]; Strand: w
  - AT1G63010.5 - [+] show detail - Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing pr...
    Distance: 0; Region: intron2 (5UTR)
  - AT1G63010.1 - [+] show detail - Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing pr...
    Distance: -86; Region: promoter
  - AT1G63010.2 - [+] show detail - Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing pr...
    Distance: 0; Region: intron1 (5UTR)
  - AT1G63010.3 - [+] show detail - Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing pr...
    Distance: 0; Region: intron1 (5UTR)
  - AT1G63010.4 - [+] show detail - Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing pr...
    Distance: 0; Region: intron2 (5UTR)
Flanking Genome Sequence: GT18993 - 3-prime edge
```
GTTGAAAACT TTTAGGCGTT TTTCATTTGT TTTTCAAGTA GTGGAATTTT 
CTGAATTGGC AAAAAAACAA TTTTGTGACT ACTAAAGCAA CTTGTCTTGG 
CTGCTTTTTA TCAATCATAT ATCATTGACT CCACTAAGAT CTAGTATTAA 
TATAATATTT TGTGTAGGCC TTATTACCTT CATGCTAAGC TCGTGTCTTC 
TGATCTATTT GTAGTTATTT TAATCTATTT TTTTTCAGAG ATTTAATCTG 
TATAAGAAGA TCTCAAGATC AGCTTTTGTG TATTGAAGAA GAACTAGGAA 
GAACGAGGAT AGATACAGGT ATTATTTTTA TATATCAAGA GCTCTGCTTT 
TGGCTTATTT GTTTATCATC TTTTTGACTT GAAATGCACG AGTTTTAAAG 
TATATATAAG CTTTGTGTTC TTGTTCTTGA GGCTGTGTTG TGGGAAGTAA 
AAATAAGCTG AATTTGGATT TGATTTGATT TGGTATTAAA TTGTCCTCAC 
TGGTTTGGCG TGATT
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 23782155 [Map]; Strand: w
- AT1G64070.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon3 (CDS)

TCCTACTTTC TCCCTGCAAG CAAGTGTCTT CCTCTTAAAT TTCGGGCGGA 
AAATCTAGTC GAACTCGATA TGAAAGATAG CCGGCTCGAG TACCTCTGGC 
CAGGAACTCA GGTTAGTTAT TGCTTATTCT CATAGTCGAA TAATTTTGCA 
AAGGAAATAA TAAGACTCAT ATCATATGGA ACAAGAGGGT TGGTTTCTCA 
TTTTATGTTC TGTTTTGTGG ATTTTTAACA TTCAGCTGCT GACGAAACTC 
AAGAAGCTAA ATTTGGAAGG TTCATATAAT TTGAAGGAAC TCCCAGATCT 
TTCAAATGCT ACAAATTTGG AGATGTTAGA TCTGAGTGTT TGCCTTGCTT 
TGGCAGAGCT TCCATCTTCT ATCAAGAATC TTCATAAACT AGATGTGATA 
TATATGGATC TCTGCGAAAG TCTTCATATG ATACCAACTA ACATCAACTT 
GGCGTCTCTT GAGACTATGT ACATGACTGG ATGCCCCCAG TTGAAAACTT 
TTCCAGCATT TTCTACAAAA ATT

AT1G63010.1

Model type: Protein coding
Short Description: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein
Computational Description: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane, plant-type vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2); Has 2617 Blast hits to 2616 proteins in 868 species: Archae - 45; Bacteria - 1644; Metazoa - 146; Fungi - 352; Plants - 233; Viruses - 1; Other Eukaryotes - 196 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G63010.2

Model type: Protein coding
Short Description: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein
Computational Description: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane, plant-type vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2); Has 2641 Blast hits to 2640 proteins in 874 species: Archae - 45; Bacteria - 1658; Metazoa - 145; Fungi - 361; Plants - 235; Viruses - 1; Other Eukaryotes - 196 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G63010.3

Model type: Protein coding
Short Description: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein
Computational Description: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2); Has 2617 Blast hits to 2616 proteins in 868 species: Archae - 45; Bacteria - 1644; Metazoa - 146; Fungi - 352; Plants - 233; Viruses - 1; Other Eukaryotes - 196 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G63010.4

Model type: Protein coding
Short Description: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein
Computational Description: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2); Has 2617 Blast hits to 2616 proteins in 868 species: Archae - 45; Bacteria - 1644; Metazoa - 146; Fungi - 352; Plants - 233; Viruses - 1; Other Eukaryotes - 196 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G63010.5

Model type: Protein coding
Short Description: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein
Computational Description: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2).
Link: InterPro Scan - TAIR

AT1G64070.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Curator Summary: Encodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans.
Computational Description: RESISTANCE TO LEPTOSPHAERIA MACULANS 1 (RLM1); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: defense response to fungus, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, sepal, flower, carpel, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT2G16870.1); Has 18146 Blast hits to 14776 proteins in 597 species: Archae - 15; Bacteria - 1058; Metazoa - 1168; Fungi - 58; Plants - 15498; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).
Link: InterPro Scan - TAIR