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GT19000

CSHL Arabidopsis genetrap mutant lines

Original: GT19000

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19000

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 271824 [Map]; Strand: c
      • AT4G00651.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT19000 - 3-prime edge 
    TCCCGTTCGT TTTCGTTACC GGTATATCCC GGTTTTCGTT TCCGTCCCGC 
    AAGTTAAATA TGAAAATGAA AACGGTAGAG GTATTTTACC GACCGTTACC 
    GACCGTTTTC ATCCCTATAA GTGACATAGC TGGACTTCTT AAACAAATGT 
    ATGAACGGGT AGGGTTCATT ACAATGTAGT TATACAGCAC TGAGATTTAT 
    GGAAGAAAAA AAGGACACAG CTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 271841 [Map]; Strand: c
      • AT4G00651.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19000 - 5-prime edge 
    TCCTACTTTC TCCCTGACTC CTTACCACTT CCATGGAATC AATGCTTCTA 
    TTCATCGTTT AAAAACCATG TTTAAAGCCT GCCAGTGTGA GTGTATCTAG 
    TGTTCATTGA TATTCCACAA GATCAAAGAC TGCTAAATCA AAGATGTCAA 
    AAAGCTCTGT TTCTGTTTCG GATTTGATTG ATTGTCAAGC TCAAGTTGGA 
    TCTTCGGTGA ATTCATCTTC CTCAAGAAAG ATAAGAAGGC GGACATAAAT 
    ACATTCATGG AAAAGCTTGT GTCATGGGAA ACTGTAAGCA CAAGGTTGGA 
    ATCCGCAATT GCTCGAGCAG TGCAACGAGA ACAAGAAGGA ACAGAGACAG 
    AAGATGAAGA GAATCCAGAT GACCAAGAGC CAGAGGTCTA TTTAGATAGT 
    GATATCGATG TATCTGAGGT TGACTAAAAC CTCTGAAGCA ATAACATTAG 
    CATCTTAAAT GTCAATTACA GGAGCAAAAA AATTTGCATT CTTAAGCCCC 
    AAACATTAAA TTAAATTTTG AGACTGTTGG GAGTTAAATA AATGACTAAC 
    TTAAGCAAAA ACAAAAAGCT TTGTTACAAA TTTACATTCC TCCTATTTGG 
    GGTCTAATGA TGAGTTACTG CGAGGAGACC TTTGATTGGA TAAACCCAAA 
    TATCTTTCTT CAGATGGTGA ATGTCTGTAA ACCCTTTGT

AT4G00651.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 2 (TAIR:AT5G51100.1); Has 34 Blast hits to 34 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR