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GT19027

CSHL Arabidopsis genetrap mutant lines

Original: GT19027

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19027

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14158359 [Map]; Strand: c
      • AT2G33420.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: -346; Region: promoter
    Flanking Genome Sequence: GT19027 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TATTTCTCTT CGTATAGGTA 
    AAAATGTAGA TTGAGACATT GAGTAGCATC TACATTAAAG AAATATATAC 
    AAAAACTGGT ATATTGTGCT GGCAACAATC TAGTACATAT ATATAAAAGA 
    TTTTACAGAT GAGATTTGGA TGGACAAAAT TTACTCGAAA TAGGAAATTA 
    GCTAATTCTA GTGTTATTTT TATTTGTGAG TATTCCTAAT TTTACTCGCA 
    TCCTCTATGA TTCTCTCAAT ACGGATTTTT TTTGCTGTAG ATTACCTTTT 
    TCCAACTTGT CGCCTTCCTC CTCCACCTCC TCAGTTTCTC CAGTTTTATT 
    TTTACGTTTG TCTTATAATA ACACAAGAGA TATGTCTTTT CCTTTCCTCT 
    TTCATCCATC TCGACCAAAT CTAATTTCAT AAAATCCCGT AAAGTTTTCC 
    TTTCCACCCT CTCCCCTCCT CCGCCATGAC CCATCATCAC CGGAGAGAGT 
    CCTTCTCGGT TACTCCCTCT ACCATGGGAG GTTCCGTCGT GCTTTGTCCT 
    AATACCGACC TTCTTTGGCC ATTTGGGAAG CTTGAAGGGC TTGATCGAGA 
    TGATATTCGT GAGACGGCTT ATGAAATCTT CTTCACGGCT TGCCGGTCTT 
    CACCGGGTTT TGGTGGTAGG ACTGCTCTCA CGTTTTACTC TAACCACAAT 
    AGCAATGACC ATCATGGAGA CGGAGGAGGA GGAATAGGAT CTGGTGGCTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14158265 [Map]; Strand: c
      • AT2G33420.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: -440; Region: promoter
    Flanking Genome Sequence: GT19027 - 5-prime edge 
    CGCTTTAGAC TTTTAGTTAT CGTATATAGA AAAGAAAAAA GACATAATGG 
    TAATCTCTTT TCTTCTGTCG GTCCAAAATG GTTACGAAAT CTAATGTATT 
    GAAAGAAAAT ATATATTACA AACTCAAGAG GTTTCACTGA GCGAGTGTTT 
    AAAACATAAT TAACTGGGGG AAAACAACTA CTAGCTACAA TGTATTGCTT 
    TACTCACATG TCAGAAGTGT TAGATTAGCC GCAGGATTTG CAAAAACTGG 
    AATGCAGTAG AGAAGATAAC TTATTACCGT AAGAGAGAGA AAATGATTTA 
    GAGACGGGCC GGTTTGGATT AGAAACGTCA TGTTTGAACA GCCACCAAAC 
    AGACCAGTTT AGTCAGGTTT TGTCTGACAA AAGACAATAT TTTAAAGTTC 
    TTGGGACTGT TAAGTTTCCG CCAACACGAC CT

AT2G33420.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT1G04470.1); Has 196 Blast hits to 182 proteins in 26 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR