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Mutant Lines
GT19031

GT19031

CSHL Arabidopsis genetrap mutant lines

Original: GT19031

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19031

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 9490162 [Map]; Strand: w
- AT4G16860.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon4 (CDS)

TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAATTA GAAGGCATGT 
GTAATCTCGA ATATCTATCA GTTCCTAGTT GGTCAAGTAG GGAATGCACT 
CAGGGCATCG TTTATTTCCC TCGTAAACTC AAAAGTGTAT TGTGGACTAA 
TTGTCCATTG AAGCGTTTGC CTTCTAATTT TAAGGCTGAG TATCTGGTTG 
AACTCATAAT GGAGTACAGT GAGCTTGAGA AGCTGTGGGA TGGTACTCAG 
GTACTAATTC TATTAGTGAT AATAAATATG TTAGAAAAAC TAAAAATAAA 
AATGTTTAAA ATGTTCATTA ACGTGTGTGC TCTCTTTTCC CCTATTTTGT 
TATCAGTCAC TTGGAAGTCT CAAGGAGATG AATTTGAGGT ATTCCAACAA 
TTTAAAAGAA ATTCCAGATC TTTCTTTAGC CATAAACCTC GAGGAATTAG 
ATCTTTTTGG ATGCGTATCT TTGGTGACAC TTCCTTCCTC GATTCAGAAT 
GCCACTAAAC TGATCTATTT AGATATGAGT GAATGCGAAA ATCTAGAGAG 
TTTTCCAACC GTTTTCAACT TGAAATCTCT CGAGTACCTC GATCTCACTG 
GATGCCCGAA TTTGAGAAAT TTCCCAGCAA TCAAAATGGG ATGTGCCTGG 
ACTAGATTAT CTCGAACAAG ATTGTTTCCG GAAGGGAGAA ATGAGATCGT 
GGTAGAAGAT TGTTTCTGGA ACAAGAATCT CCCTGCTGGA CTAGATTATC 
TCGACTGCCT TATGAGATGT ATGCCT

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 9490225 [Map]; Strand: w
  - AT4G16860.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: 0; Region: exon4 (CDS)
2. Chromosome: 4; Position: 9521937 [Map]; Strand: w
  - AT4G16920.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: 0; Region: exon4 (CDS)
Flanking Genome Sequence: GT19031 - 5-prime edge
```
CATCCTACTT TATCCCTGCT TCTATGATTT TAAATCTATT AATAGCCCCC 
CCCAACAATT TAACTCCCTC AGATTAGTGG CCTTCTGAAT CAAGGAAGGA 
AGTGTCTCCA AATATTCGCA TT
```

AT4G16860.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Curator Summary: Confers resistance to Peronospora parasitica. RPP4 is coordinately regulated by transcriptional activation and RNA silencing.
Computational Description: recognition of peronospora parasitica 4 (RPP4); FUNCTIONS IN: LRR domain binding; INVOLVED IN: defense response to fungus, incompatible interaction, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT4G16920.1); Has 24682 Blast hits to 14766 proteins in 601 species: Archae - 8; Bacteria - 1131; Metazoa - 1818; Fungi - 127; Plants - 20736; Viruses - 36; Other Eukaryotes - 826 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G16920.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT4G16950.2); Has 33072 Blast hits to 18315 proteins in 784 species: Archae - 24; Bacteria - 2125; Metazoa - 2462; Fungi - 169; Plants - 26873; Viruses - 34; Other Eukaryotes - 1385 (source: NCBI BLink).
Link: InterPro Scan - TAIR