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GT19041

CSHL Arabidopsis genetrap mutant lines

Original: GT19041

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19041

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4661216 [Map]; Strand: c
      • AT3G14067.1 - [+] show detail - Subtilase family protein
        Distance: -432; Region: promoter
      • AT3G14070.1 - [+] show detail - cation exchanger 9
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19041 - 5-prime edge
    CGGTTTGGTT TGGGCTATGG TGATACTCCC GCGCAACGAC ATGCAACCTA 
    GCAGAACCTT AGGTGTTGGA CTCATTGCAA TATATCTGAT ATTCGTCACT
    TTCAGGCTGA GCTGCGCCAT GGGATTCATA CCATGGGCTG CTTAAAAAGC
    TATGTATAAC CTTGTTTAGT CTCTAACCAA CAAACTAATC AGAGGCTTAT
    TGTATACCAA AGAATTGATC ATGACATGAG AGTCGTAGTT TTGAATCTTA
    GTGTGTTTGT TTGTTATTGG TTTGTCCTTT TGTCATACCT GCCCATTTTC
    ATAACCGCAA ACATTTCTTA TTATCCTCGT GTCAACATTA AAGCAGTCAT
    GTGACCCACG TCTCCTCCTT GATTATTCCA TTATTCACTG TTATCTTTT

AT3G14067.1

Model type
Protein coding
Short Description
Subtilase family protein
Computational Description
Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 8271 Blast hits to 7174 proteins in 1143 species: Archae - 230; Bacteria - 4646; Metazoa - 71; Fungi - 664; Plants - 1990; Viruses - 0; Other Eukaryotes - 670 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14070.1

Model type
Protein coding
Short Description
cation exchanger 9
Curator Summary
Involved in cation (K, Na and Mn) homeostasis and transport
Computational Description
cation exchanger 9 (CAX9); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation calcium exchanger 4 (TAIR:AT1G54115.1); Has 3863 Blast hits to 3216 proteins in 856 species: Archae - 67; Bacteria - 789; Metazoa - 1939; Fungi - 299; Plants - 225; Viruses - 0; Other Eukaryotes - 544 (source: NCBI BLink).
Link
InterPro Scan - TAIR