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GT19047

CSHL Arabidopsis genetrap mutant lines

Original: GT19047

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19047

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17739253 [Map]; Strand: w
      • AT4G37750.1 - [+] show detail - Integrase-type DNA-binding superfamily protein
        Distance: -261; Region: promoter
    Flanking Genome Sequence: GT19047 - 3-prime edge 
    CTGAAATGAG TTTTTTTTTG TAAGATATGA TACCTCTCTC TTACAGAAAA 
    TTATCACTAC AAAATTATTC TAAGATTTTT AAGTGGTTAA CGATTGTTCT 
    GTTCATCTCA CTCGACA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17739318 [Map]; Strand: w
      • AT4G37750.1 - [+] show detail - Integrase-type DNA-binding superfamily protein
        Distance: -196; Region: promoter
    Flanking Genome Sequence: GT19047 - 3-prime edge 
    TCCCTATATA CACATTCTAC CCGACCGGAT CGTATCGGTA TATCCATCTC 
    ACTCGACACA AATATCTGAA ATGAGTTTTT TTTTGTAAGA TATGATACCT 
    CTCTCTTACA GAAAATTATC ACTACAAAAT TATTCTAAGA TTTTTAAGTG 
    GTTAACGATT GTTCTGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17739476 [Map]; Strand: w
      • AT4G37750.1 - [+] show detail - Integrase-type DNA-binding superfamily protein
        Distance: -38; Region: promoter
    Flanking Genome Sequence: GT19047 - 5-prime edge 
    TTCAAAGACT TTACAAAAAT AAAATAATAA TAAGGTGGAA TTTGTAGGGC 
    TAAAAGCGAA AAATAAAAAT AAAATAAAAG TAAAGAAACG TCTTTCTCAA 
    TAAGAACACA GATCCCAACG GATTCAAACA GCAAATTTGT GCTTTGCTCT 
    TCTCTCTTAT TATAATATCC TCTCAAAAAC CCTCTCCTAT ATCCTCCTAA 
    AGCCCCCCTT CCTTGTTTCT CTACCGCAAC AAAGAAAAAA CAAAAGTTTG 
    AGAAAAATGG TGTGTTCGTT GTGTAACCAA TGATTGGGTT TTAGCTTACT 
    ACTTCGAGAG ATTATAAGAA AGAGAGAGTG AAGATACATT ATAGAAAGAA 
    GAGAAGCAGA AACCAAAAAA AGAAACCATG AAGTCTTTTT GTGATAATGA 
    TGATAATAAT CATAGCAACA CGACTAATTT GTTAGGGTTC TCATTGTCTT 
    CAAATATGAT GAAAATGGGA GGTAGAGGAG GTAGAGAAGC TATTTACTCA 
    TCTTCAACTT CTTCAGCTGC AACTTCTTCT TCTTCTGTTC CACCTCAACT 
    TGTTGTTGGT GACAACACTA GCAACTTTGG TGTTTGCTAT GGATCTAACC 
    CAAATGGAGG AATCTATTCT CACATGTCTG TGATGCCACT CAGATCTGAT 
    GGTTCTCTTT GCTTAATGGA AGCTCTCAAC AGATCTTCTC ACTCGAATCA 
    CCATCAAGGT CAGTAGTAGT AATGTTGGAG TTTTTAGTTT TCTTG

AT4G37750.1

Model type
Protein coding
Short Description
Integrase-type DNA-binding superfamily protein
Curator Summary
ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.
Computational Description
AINTEGUMENTA (ANT); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G72570.1); Has 7251 Blast hits to 5191 proteins in 264 species: Archae - 0; Bacteria - 9; Metazoa - 18; Fungi - 8; Plants - 7086; Viruses - 4; Other Eukaryotes - 126 (source: NCBI BLink).
Link
InterPro Scan - TAIR