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Mutant Lines
GT19062

GT19062

CSHL Arabidopsis genetrap mutant lines

Original: GT19062

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19062

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 26459346 [Map]; Strand: w
  - AT5G66210.4 - [+] show detail - calcium-dependent protein kinase 28
    Distance: 0; Region: exon1 (CDS)
  - AT5G66210.2 - [+] show detail - calcium-dependent protein kinase 28
    Distance: 0; Region: exon2 (CDS)
  - AT5G66210.1 - [+] show detail - calcium-dependent protein kinase 28
    Distance: 0; Region: exon1 (CDS)
  - AT5G66210.3 - [+] show detail - calcium-dependent protein kinase 28
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: GT19062 - 3-prime edge
```
GCTAGCAACA GGAGACGAAG CAGTCAGACC AAATCCAAGG CTGCTCCTAC 
TCCCATCGAT ACCAAGGCCT CTACCAAACG CCGAACCGGC TCCATCCCCT 
GCGGCAAGCG TACCGATTTT GGCTACTCCA AAGACTTCCA CGATCACTAC 
ACCATCGGCA AGTTGCTCGG CCATGGTCAA TTCGGCTACA CCTACGTCGC 
CATCCACAGA CCCAATGGAG ATCGCGTCGC CGTCAAAAGA CTCGATAAGT 
CTAAGGTACA CTTTTTCCAG CCCTTACTAG G
```
3 prime edge [+] show sequence
1. Chromosome: 5; Position: 26459098 [Map]; Strand: w
  - AT5G66210.4 - [+] show detail - calcium-dependent protein kinase 28
    Distance: 0; Region: intron1 (CDS)
  - AT5G66210.2 - [+] show detail - calcium-dependent protein kinase 28
    Distance: 0; Region: intron2 (CDS)
  - AT5G66210.1 - [+] show detail - calcium-dependent protein kinase 28
    Distance: 0; Region: intron1 (CDS)
  - AT5G66210.3 - [+] show detail - calcium-dependent protein kinase 28
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: GT19062 - 3-prime edge
```
GTCTAAGGAA CACTTTTTCC AGCCCTTACA AGGGTTTCTT TTCCCCTTTT 
ACAAGTTGTG GGAATCTTCC TCCACTACCA TCTACAAAAT TCACATCAAA 
AAATAGTTGC GGATCTTTTT AATTAAGTTA AACACTGATT CCCAATTGGA 
ACTTGGTTAA GTAAGTAAGG GCTCTTTCTC GGTCCTTTCA TTTGCAACAT 
TGTCCTGGGG TTTTACTGCA TCCTCTGCTC TGCTTTGAGG CACTCATCAC 
CATGTTTTGC TCGCAGATGG TTCTTCCTAT TGCTGTTGAG GATGTCAAGC 
GGGAGG
```

5 prime edge [+] show sequence

Chromosome: 5; Position: 26459500 [Map]; Strand: w
- AT5G66210.4 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon1 (5UTR)
- AT5G66210.2 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron1 (5UTR)
- AT5G66210.1 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon1 (5UTR)
- AT5G66210.3 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon1 (5UTR)

ACCCATGGCT CTGATGAATC GAGAAAGTTA GAAAAGAAAG GGATTAATAA 
AAGAAAGAGA TGAAAGAAGA AAGAAGAAGA AGAGAGGAAG GCAGAGAAGA 
TTATTAGAGT TGAGTTGGTC AAACCCAAAG CGCCGAGTGA ACCCCTCCAA 
GGAGGATCCC CAACGAAAGA TCCTTCTCAC TTTCCCACTT TTTTTGCCTT 
TTCTTCTTCT TTTTTTTTAA TAATAATAAT AACCGGGGTT TTTTTAACCT 
TGGTTTGGTG GTAAAACATT TCGGAAAATT TTAACGGTCT TTTCCCGAAG 
TCAAAAATAA GGAATTTGTT TTTGGGGGGG AAAGCAAAAA CCACTGACTG 
ACCCCCCCGG GGGGATGGGG GAAGCTCCTT GTTGGGGCCC AACCCCTTCC 
CCCGGAAAAA CTCATTTCGA TTCACCTTCA AAGTTGGCCA TTATCATTAT 
TTATGGCCCC TAAATTATAA GGGACCCGGG GCCCCCCATT AATAACTTTC 
TAACAAACTC CATATTTAAG AAAAGCCTCC TCCTACAAGC CGGGACCTTT 
GGGGAATTT

AT5G66210.1

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 124563 Blast hits to 121753 proteins in 3731 species: Archae - 157; Bacteria - 14240; Metazoa - 45960; Fungi - 14836; Plants - 27830; Viruses - 455; Other Eukaryotes - 21085 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.2

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, ATP binding, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.3

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, ATP binding, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 122907 Blast hits to 120110 proteins in 3700 species: Archae - 157; Bacteria - 14345; Metazoa - 44968; Fungi - 14295; Plants - 27583; Viruses - 455; Other Eukaryotes - 21104 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.4

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR