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GT19070

CSHL Arabidopsis genetrap mutant lines

Original: GT19070

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19070

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT19070 - 3-prime edge 
    GAAGGTGATT CTTTTTTTTT TGGTTGGTTT TGGGGGGTTG AGAGTGGAGG 
    AAACCCCTTT GGTATTGGAG GGGAAAAATT TTAAATTGGT TTTAGAACAA 
    AGGGAAAAAT GGGACCCCGT GGGGAAAAGG AAAAATGGAT TTAATTCTTT 
    TTGGAAAAAT TTTTTTGGGG AAAAAAAAAA TTTTTAAAAT TTGGGGGTGA 
    AAAAATTTAA AAACCCTTTG GTTCGGGGAA AGGAAAGGAA AGGAAGAGCC 
    AGGGTTTTTA ACCAAATTAA GGGTAAAAAA TTTTAGGGGA GGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 221169 [Map]; Strand: w
      • AT2G01490.1 - [+] show detail - phytanoyl-CoA dioxygenase (PhyH) family protein
        Distance: -77; Region: promoter
    Flanking Genome Sequence: GT19070 - 5-prime edge 
    CCTCTTTATC CCTGCGTGGA ACTGGCTTCT TTCGCCAACA CAATCAGAGT 
    TTGGCTCACG GAAAAAGTGT GCGCGTGGGG AAGAAAAGGG TCTCATATAT 
    AATTGGAGTG TAAAATGTTT GACCTTTTTG TTTGGGTTTA TCTCTTTTAA 
    ACACAACAAC AGATAAATTT GTTGGTTTCA AGTAATATCA ATTTCCCGGC 
    GAAATCTCCA CCAGAGTTAT GGGAATCACC GGAAGTCTAA CGCCAGATCA 
    GCTCGATTTT TTCCACTCTC AAGGTTTGTT TCTCTGAAAT TTCATTCCTC 
    GTAACTCTCT ACAAATGAAG AATGATTTTG TAATTCAATT CAATGGAATG 
    GATATAAAAA AAAAGGGTAT TTGGTAATCG AATCGTTCGC GAGTGAGGAT 
    GAGATTAGAG GCTTAAGGAA GAGGATGGAT GAGTTGCTTA ATCAGTTTGA 
    TTGTTCCGTC TCCTCTATCT TCTCCACAAA AAATAAGGTT TTTATTTCTT 
    TACCAAAGGT TTTGATTCAA AATCATCATC ATATTGTTAT AAGAATGGTT 
    GTTTTGA

AT2G01490.1

Model type
Protein coding
Short Description
phytanoyl-CoA dioxygenase (PhyH) family protein
Computational Description
phytanoyl-CoA dioxygenase (PhyH) family protein; FUNCTIONS IN: phytanoyl-CoA dioxygenase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phytanoyl-CoA dioxygenase (InterPro:IPR008775); Has 2926 Blast hits to 2921 proteins in 334 species: Archae - 4; Bacteria - 485; Metazoa - 347; Fungi - 101; Plants - 64; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink).
Link
InterPro Scan - TAIR