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Mutant Lines
GT19079

GT19079

CSHL Arabidopsis genetrap mutant lines

Original: GT19079

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19079

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 11093159 [Map]; Strand: c
- AT4G20670.1 - [+] show detail - Domain of unknown function (DUF26)
  Distance: 0; Region: exon2 (CDS)

TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TATTCGTAGG 
AGATGTCCAA GAAATAAGGG AGCAATAATA TGGTATGACC AATGTCTTTT 
AAAGATATCT TCAGTTGCCT CCTTCAATAA GATAGATTAT GAGAACGATT 
TCTATTTGTC CAACCCAAAC AACATGAGTG ATCGGGGGTT GTTCAACAAG 
GAGACGTCGG CTCTCTTGGA GAAGCTGGCA TATAAAGCCT CCGATAGAAA 
CAACTTGGAT GGTAAACAAT TGGTGTTGTA CGCAGCAGGG GAGAAGAGAA 
TTGGGACAAA GAAGGTGTAT GCAATGGTGC AGTGTACGAA AGACTTAATA 
TTTACAAAGT GCTTTGAGTG TTTGGAAGGG ATTTTGAGGA AGTTTCCACA 
GTGTTGTGAC GGTAAACGAG GAGGGAGAGT TTTCGGTACG AGCTGTAACT 
TTAGGTATGA GTTATATCCT TTTCTTAGAA ACTAACAGCA ACAGTACAAT 
GAGAGCTCCA TATTAAATGA AAGGGTTCTA GAGATAAACA GTCTTATAAT 
ATACACTGTG TTGCATTTTA GTACGTGAAC TTGAGCGAAT AAATGTACTT 
CCCTCTTTGT TTTTTGTGAA CTTGAGTTAT TAAGAGGAAA TCTTCAAGTA 
AAGAATTTAT CTAATAGTAT ATACATCCCA CATA

3 prime edge [+] show sequence

Chromosome: 4; Position: 11093157 [Map]; Strand: c
- AT4G20670.1 - [+] show detail - Domain of unknown function (DUF26)
  Distance: 0; Region: exon2 (CDS)

GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATTCGTA 
GGAGATGTCC AAGAAATAAG GGAGCAATAA TATGGTATGA CCAATGTCTT 
TTAAAGATAT CTTCAGTTGC CTCCTTCAAT AAGATAGATT ATGAGAACGA 
TTTCTATTTG TCCAACCCAA ACAACATGAG TGATCGGGGG TTGTTCAACA 
AGGAGACGTC GGCTCTCTTG GAGAAGCTGG CATATAAAGC CTCCGATAGA 
AACAACTTGG ATGGTAAACA ATTGGTGTTG TACGCAGCAG GGGAGAAGAG 
AATTGGGACA AAGAAGGTGT ATGCAATGGT GCAGTGTACG AAAGACTTAA 
TATTTACAAA GTGCTTTGAG TGTTTGGAAG GGATTTTGAG GAAGTTTCCA 
CAGTGTTGTG ACGGTAAACG AGGAGGGAGA GTTTTCGGTA CGAGCTGTAA 
CTTTAGGTAT GAGTTATATC CTTTTCTTAG AAACTAACAG CAACAGTACA 
ATGAGAGCTC CATATTAAAT GAAAGGGTTC TAGAGATAAA CAGTCTTATA 
ATATACACTG TGTTGCATTT TAGTACGTGA ACTTGAGCGA ATAAATGTAC 
TTTCCTCTTT GTTTTTTGTG AACTTGAGTT ATTAAGAGGA AATCTTCAAG 
TAAAGAATTT ATCTAATAGT ATATACATCC CACATAGAAT ACCAAATAGC 
TCAGCTCATA CAAACTCTCT CATAATGAGA GAAAAAAATC CTGAAATAAG 
GGTAAGAAAA ACTCTTATGC CTCAAGGTTT TAGTAAATCT CATAATTTTG 
GCC

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 11049093 [Map]; Strand: c
  - AT4G20530.1 - [+] show detail - Protein with domains of unknown function (DUF26 and DUF1204)
    Distance: 0; Region: intron1 (CDS)
2. Chromosome: 4; Position: 11052352 [Map]; Strand: c
  - AT4G20540.1 - [+] show detail - Protein with domains of unknown function (DUF26 and DUF1204)
    Distance: 0; Region: intron1 (CDS)
3. Chromosome: 4; Position: 11055611 [Map]; Strand: c
  - AT4G20550.1 - [+] show detail - Protein with domains of unknown function (DUF26 and DUF1204)
    Distance: 0; Region: intron1 (CDS)
4. Chromosome: 4; Position: 11058870 [Map]; Strand: c
  - AT4G20560.1 - [+] show detail - Protein with domains of unknown function (DUF26 and DUF1204)
    Distance: 0; Region: intron1 (CDS)
5. Chromosome: 4; Position: 11062129 [Map]; Strand: c
  - AT4G20570.1 - [+] show detail - Protein with domains of unknown function (DUF26 and DUF1204)
    Distance: 0; Region: intron1 (CDS)
6. Chromosome: 4; Position: 11065388 [Map]; Strand: c
  - AT4G20580.1 - [+] show detail - Protein with domains of unknown function (DUF26 and DUF1204)
    Distance: 0; Region: intron1 (CDS)
7. Chromosome: 4; Position: 11068647 [Map]; Strand: c
  - AT4G20590.1 - [+] show detail - Protein with domains of unknown function (DUF26 and DUF1204)
    Distance: 0; Region: intron1 (CDS)
8. Chromosome: 4; Position: 11071906 [Map]; Strand: c
  - AT4G20600.1 - [+] show detail - Protein with domains of unknown function (DUF26 and DUF1204)
    Distance: 0; Region: intron1 (CDS)
9. Chromosome: 4; Position: 11075165 [Map]; Strand: c
  - AT4G20610.1 - [+] show detail - Protein with domains of unknown function (DUF26 and DUF1204)
    Distance: 0; Region: intron1 (CDS)
10. Chromosome: 4; Position: 11078424 [Map]; Strand: c
  - AT4G20620.1 - [+] show detail - Protein with domains of unknown function (DUF26 and DUF1204)
    Distance: 0; Region: intron1 (CDS)
11. Chromosome: 4; Position: 11083270 [Map]; Strand: c
  - AT4G20630.1 - [+] show detail - Protein with domains of unknown function (DUF26 and DUF1204)
    Distance: 0; Region: intron1 (CDS)
12. Chromosome: 4; Position: 11086529 [Map]; Strand: c
  - AT4G20640.1 - [+] show detail - Protein with domains of unknown function (DUF26 and DUF1204)
    Distance: 0; Region: intron1 (CDS)
13. Chromosome: 4; Position: 11089788 [Map]; Strand: c
  - AT4G20650.1 - [+] show detail - receptor-like protein kinase-related
    Distance: 0; Region: intron1 (CDS)
14. Chromosome: 4; Position: 11101432 [Map]; Strand: c
  - AT4G20710.1 - [+] show detail - similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G20650.1); similar...
    Distance: 0; Region: intron1 (NonCoding)
Flanking Genome Sequence: GT19079 - 5-prime edge
```
CAAGAACAAT ATTGCATTGT TTAATCAGTA TTTTTTAACT AGCCTT
```

AT4G20530.1

Model type: Protein coding
Short Description: Protein with domains of unknown function (DUF26 and DUF1204)
Computational Description: Protein with domains of unknown function (DUF26 and DUF1204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902), Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20540.1

Model type: Protein coding
Short Description: Protein with domains of unknown function (DUF26 and DUF1204)
Computational Description: Protein with domains of unknown function (DUF26 and DUF1204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902), Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20550.1

Model type: Protein coding
Short Description: Protein with domains of unknown function (DUF26 and DUF1204)
Computational Description: Protein with domains of unknown function (DUF26 and DUF1204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902), Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20560.1

Model type: Protein coding
Short Description: Protein with domains of unknown function (DUF26 and DUF1204)
Computational Description: Protein with domains of unknown function (DUF26 and DUF1204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902), Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20570.1

Model type: Protein coding
Short Description: Protein with domains of unknown function (DUF26 and DUF1204)
Computational Description: Protein with domains of unknown function (DUF26 and DUF1204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902), Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20580.1

Model type: Protein coding
Short Description: Protein with domains of unknown function (DUF26 and DUF1204)
Computational Description: Protein with domains of unknown function (DUF26 and DUF1204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902), Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20590.1

Model type: Protein coding
Short Description: Protein with domains of unknown function (DUF26 and DUF1204)
Computational Description: Protein with domains of unknown function (DUF26 and DUF1204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902), Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20600.1

Model type: Protein coding
Short Description: Protein with domains of unknown function (DUF26 and DUF1204)
Computational Description: Protein with domains of unknown function (DUF26 and DUF1204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902), Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20610.1

Model type: Protein coding
Short Description: Protein with domains of unknown function (DUF26 and DUF1204)
Computational Description: Protein with domains of unknown function (DUF26 and DUF1204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902), Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20620.1

Model type: Protein coding
Short Description: Protein with domains of unknown function (DUF26 and DUF1204)
Computational Description: Protein with domains of unknown function (DUF26 and DUF1204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902), Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20630.1

Model type: Protein coding
Short Description: Protein with domains of unknown function (DUF26 and DUF1204)
Computational Description: Protein with domains of unknown function (DUF26 and DUF1204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902), Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20640.1

Model type: Protein coding
Short Description: Protein with domains of unknown function (DUF26 and DUF1204)
Computational Description: Protein with domains of unknown function (DUF26 and DUF1204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902), Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20650.1

Model type: Protein coding
Short Description: receptor-like protein kinase-related
Computational Description: receptor-like protein kinase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902), Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20630.1); Has 1323 Blast hits to 1300 proteins in 55 species: Archae - 8; Bacteria - 25; Metazoa - 41; Fungi - 8; Plants - 1236; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20670.1

Model type: Protein coding
Short Description: Domain of unknown function (DUF26)
Computational Description: Domain of unknown function (DUF26); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF26 and DUF1204) (TAIR:AT4G20620.1); Has 1465 Blast hits to 1431 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1465; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20710.1

Model type: Pseudogene
Curator Summary: Pseudogene of AT4G20710; DUF-26 IntrePro domain family protein
Computational Description: similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G20650.1); similar to unknown protein [Arabidopsis lyrata] (GB:AAN46206.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902); contains InterPro domain Protein of unknown function DUF1204 (InterPro:IPR009596)
Link: InterPro Scan - TAIR