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GT19086

CSHL Arabidopsis genetrap mutant lines

Original: GT19086

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19086

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19579956 [Map]; Strand: c
      • AT5G48310.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
      • AT5G48310.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19086 - 3-prime edge
    TTACCGACCG TTACCGACCG TTTTCATCCC TAGTCGTTCA CTAGCTGGAG 
    TTGAATTCTT CAATGCGAAT CTCCGAAGCT CTAATTCACA ATCTGTGACT
    CTTCGATTCA TAAACGGAAC TTCAATTCTC AGATTCTTAT CTTTCAACAT
    TCCTCTATTC AATTTCCAAT TCGACTTGTC ACCAAACACT TCTTC
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19579947 [Map]; Strand: c
      • AT5G48310.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
      • AT5G48310.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19086 - 3-prime edge
    TAGAGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT AGTCGTTCAC 
    TAGCTGGAGT TGAATTCTTC AATGCGAATC TCCGAAGCTC TAATTCACAA
    TCTGTGACTC TTCGATTCAT AAACGGAACT TCAATTCTCA GATTCTTATC
    TTTCAACATT CCTCTATTCA ATTTCGAATT CGACTTGTCA CCAAACACTT
    CTTCTTCATC GTAAAGTCTC ACAATCACTT CTTCTCACTC GACCACTTCA
    ACATCGTAAT CAGAGAATAA CAATTCGTTT CCTTCTCCGG TACCCGACCG
    GATCGTATCG GTATATTC

AT5G48310.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G48310.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1).
Link
InterPro Scan - TAIR