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GT19092

CSHL Arabidopsis genetrap mutant lines

Original: GT19092

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19092

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 997264 [Map]; Strand: c
      • AT2G03280.1 - [+] show detail - O-fucosyltransferase family protein
        Distance: 0; Region: exon5 (CDS)
      • AT2G03280.2 - [+] show detail - O-fucosyltransferase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT19092 - 3-prime edge 
    ACCGGATCGC ATGGGAATAT TCTCGGCATC CCACCATTTG AAGGTCAAGA 
    GAAAGACCAT TGTTCGCCAA TCGCGTATCA CTCCGAACGA AATGTATAAC 
    TTTACGTTTA CTAAACCGCG GCAATACCTG AAACAAACAA AAAATCCGAT 
    CAATCATAAG CATTTCAGAT TCATCACATG GAGGCAAAAC AAAAACACCA 
    AAGAAAGTTG CAAATAAACC TGTTGCAAGT AATACTTGTC GTTGGACCAG 
    CTCACAGGCG GCATTTCGAA CAATTTGAAT CCATACTTCT TACTATAACG 
    TTTAGGAAGT CTCCTTATGA TCCTAACT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 997302 [Map]; Strand: c
      • AT2G03280.1 - [+] show detail - O-fucosyltransferase family protein
        Distance: 0; Region: exon5 (CDS)
      • AT2G03280.2 - [+] show detail - O-fucosyltransferase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT19092 - 3-prime edge 
    TGAAGGTCAA GAGAAAGACC ATTGTTCGCC AATCGCGTAT CACTCCGAAC 
    GAAATGTATA ACTTTACGTT TACTAAACCG CGGCAATACC TGAAACAAAC 
    AAAAAATCCG ATCAATCATA AGCATTTCAG ATTCATACCA GGCAGGCAAA 
    ACAAAAACAC CAAAGAAAGT TGCAAATAAA CCTGTTGCAA GTAATACTTG 
    TCGTTGGACC AGCTCACAGG CGGCATTTCG AACAATTTGA ATCCATACTT 
    CTTACTATAA CGTTTAGGAA GTCTCCTTAT GATCCTAA

AT2G03280.1

Model type
Protein coding
Short Description
O-fucosyltransferase family protein
Computational Description
O-fucosyltransferase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G14020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03280.2

Model type
Protein coding
Short Description
O-fucosyltransferase family protein
Computational Description
O-fucosyltransferase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G14020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR