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GT19098

CSHL Arabidopsis genetrap mutant lines

Original: GT19098

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19098

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3339403 [Map]; Strand: w
      • AT5G10560.1 - [+] show detail - Glycosyl hydrolase family protein
        Distance: -37; Region: promoter
    Flanking Genome Sequence: GT19098 - 5-prime edge 
    AGAGTCAACT GAAGATTCAT ATTTTGGAGG AAATAAATCT GTTGAGAAGA 
    GTGAAAAAGA AAACTAAAAG GTATAGTTTT AAACCGAACT AAATAGACCG 
    GTAAAATCTA GATTAACAAT TGGAC

AT5G10560.1

Model type
Protein coding
Short Description
Glycosyl hydrolase family protein
Computational Description
Glycosyl hydrolase family protein; FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT1G78060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR