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Mutant Lines
GT19107

GT19107

CSHL Arabidopsis genetrap mutant lines

Original: GT19107

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19107

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 23152606 [Map]; Strand: c
  - AT5G57150.4 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: 0; Region: exon2 (CDS)
  - AT5G57150.2 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: 0; Region: exon2 (CDS)
  - AT5G57150.3 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: 0; Region: exon2 (CDS)
  - AT5G57150.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: GT19107 - 3-prime edge
```
ATCCCTAATT CGAGTTCGCT TGACGGAGCT GCTTCGTCGC CGGCTTCTAA 
GAATATTGTG TCGGAGAGAA ACAGAAGACA GAAACTTAAC CAGAGACTCT 
TCGCTCTTCG ATCAGTTGTT CCCAATATCA CTAAGGTTTC TCTTTTTCCC 
CTTGTTTTTT GTCTTCTAAT TCCAGGATTC AAACTTATTA TAGACTCTGT 
TTTTGTTTTC TGATAGATGG ATAAAGCCTC AATAATCAAA GATGCTATTA 
GTTACATAGA AGGATTACAA TATGAAGAAA AGAAGCTCGA AGCTGAGATC 
AGAGAACTTG AATCTACACC AAAGAGTAGC CTTAGTTTCA GCAAAGATTT 
TGATCGTGAT TTACTT
```
3 prime edge [+] show sequence
1. Chromosome: 5; Position: 23152567 [Map]; Strand: c
  - AT5G57150.4 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: 0; Region: exon2 (CDS)
  - AT5G57150.2 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: 0; Region: exon2 (CDS)
  - AT5G57150.3 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: 0; Region: exon2 (CDS)
  - AT5G57150.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: GT19107 - 3-prime edge
```
AACGGTAGAG GTTTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAATTC 
GAGTTCGCCG GATGGAGCTG CTTCGTCGCC GGCTTCTAAG AATATTGTGT 
CGGAGAGAAA CAGAAGACAG AAACTTAACC AGAGACTCTT CGCTCTTCGA 
TCAGTTGTTC CCAATATCAC TAAGGTTTCT CTTTTTCCCC TTGTTTTTTG 
TCTTCTAATT CCAGGATTCA AACTTATTAT AGACTCTGTT TTTGTTTTCT 
GATAGATGGA TAAAGCCTCA ATAATCAAAG ATGCTATTAG TTACATAGAA 
GGATTACAAT ATGAAGAAAA GAAGCTCGAA GCTGAGATCA GAGAACTTGA 
ATCTACACCA AAGAGTAGCC TTAGTTTCAG CAAAGATTTT GATCGTGATT 
TACTT
```

AT5G57150.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G29930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G57150.2

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G29930.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G57150.3

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G29930.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G57150.4

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G29930.3).
Link: InterPro Scan - TAIR