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GT19164

CSHL Arabidopsis genetrap mutant lines

Original: GT19164

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19164

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 16835032 [Map]; Strand: w
      • AT1G44350.1 - [+] show detail - IAA-leucine resistant (ILR)-like gene 6
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT19164 - 5-prime edge 
    AGGTGAAATG GCTATCTCCG AGCAAATCTA TGGTGACTTC CTTCAAGTGA 
    TTGTATGTTG CATCATTGTT CGTAGTTGGC GGGTATATCG CATTCTGCTT 
    CTCAAAGAAG TTCACTGTCG CTTGGCAACC GAAAACCCCG ACCTGATCCA 
    TGAGTACCTG CCGGTACAAA AGACGCATAT CTTTTAATAT GGTGTTGCAA 
    TAACAGTGGA GCTAGACAAA ATATTTGTAA TGTCCATTGT GATTGTTGTG 
    TGTGACATAG AACCTGATGA GACCAAGCAC CAAGTCCAAC CAATGTATTT 
    TCGGACCGTC TCGTACCAAG TTAAAGATAG AAGTGAAAAA TGCGATTTAC 
    AATTTGTTTT TCTTTTTTTC TTTTTCCCAT TTGATCAGCT TTATAAACAT 
    TATTTGTAAT TCACCTTAGT TTGGTTTTAG CAAAATAATA AATTCAAACG 
    TATTATATCA ATAATTAAAC AAATTTATGT TATATTTTAT AACTACATCT 
    ATTTCTATAT ATATGAAATT CAAATTCAAT TTTTGTAAGC TTTGGTTTAT 
    TCAGTTCAAG TTTAATTCAA TCACACTAAA ATCTGTAATT ATTTTATAAA 
    ATTTTTTTTG TATTAGTTTA GTAATTACTG TTTAGGTTTA GAAATTATTG 
    TTTAGGTTTC TAAGCATGAA TGTTGTACTA GTTTAGTAAT AACTGTTTAG 
    GTTTCT

AT1G44350.1

Model type
Protein coding
Short Description
IAA-leucine resistant (ILR)-like gene 6
Curator Summary
encodes a protein similar to IAA amino acid conjugate hydrolase.
Computational Description
IAA-leucine resistant (ILR)-like gene 6 (ILL6); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, regulation of systemic acquired resistance, auxin metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: peptidase M20/M25/M40 family protein (TAIR:AT1G51760.1); Has 12322 Blast hits to 12314 proteins in 1908 species: Archae - 129; Bacteria - 9070; Metazoa - 89; Fungi - 234; Plants - 310; Viruses - 0; Other Eukaryotes - 2490 (source: NCBI BLink).
Link
InterPro Scan - TAIR