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GT19186

CSHL Arabidopsis genetrap mutant lines

Original: GT19186

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19186

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25241817 [Map]; Strand: w
      • AT5G62880.1 - [+] show detail - RAC-like 10
        Distance: 2643; Region: intergenic
      • AT5G62890.2 - [+] show detail - Xanthine/uracil permease family protein
        Distance: -1434; Region: intergenic
    Flanking Genome Sequence: GT19186 - 5-prime edge 
    TCCTACTTTC TCCAAAGTAT TTGATTATCT GGAGAAGAAA AAATAAAGAT 
    GATAAATAAA AAAATTGTCG GCAATAGAAA GATGAGTTTA GGTCAAAATA 
    GTTATGTACT ATAGTTATTA CCGACGTAAA CACTGATAAA TTGAAAATGA 
    TGCATCACTG GTTTTTGACA AAACGTCGAA TTAGAACAAA CATGACTCAA 
    TGTATTAGAA AGTCAAAATA TACACATCTC CTATTGAATA GTAGTAGCTT 
    GATAACTTTG TTTATCTTAA TGAAATCGTC GTATTAAAGA AGTTTAGTGT 
    CGAGATTAAA TCTCGAGTCC TATCACTCTA TCAGCCACTA GAATATATAA 
    TGTCCCACTA AATTCGATAA CAAATTATCT TTAAAGTTAA AGTATCTTTA 
    TAATTGTTTT GTTAGATTGT TTTTATATAT AGATCACGGG ACTACAAGAA 
    AAAAAAGTAG ACGTGACAAT TATCTTTTCT GTGTTTTTTT CTCGTTATCT 
    CTAGTTTTGT TTGATGCGTA TGTATACAAT TTGGACAATA CTATAATAAA 
    GTATTCTTAA TAAGATTCTC CAATCGTTTT TATATTATTC TTAATATAAA 
    ACCAAAAGAG ATGGATGATT TCAAATGATG CCTACAAAGA ATAACATCCG 
    TGTCATTAAT AGAAATCGCA AGAAATTTTA TATATACTAA T

AT5G62880.1

Model type
Protein coding
Short Description
RAC-like 10
Curator Summary
A member of ROP GTPase gene family.
Computational Description
RAC-like 10 (RAC10); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RHO-related protein from plants 10 (TAIR:AT3G48040.1); Has 24116 Blast hits to 24088 proteins in 664 species: Archae - 8; Bacteria - 52; Metazoa - 12643; Fungi - 3430; Plants - 2696; Viruses - 20; Other Eukaryotes - 5267 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G62890.2

Model type
Protein coding
Short Description
Xanthine/uracil permease family protein
Computational Description
Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: cell wall, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT5G49990.1); Has 9339 Blast hits to 9322 proteins in 1919 species: Archae - 67; Bacteria - 7633; Metazoa - 348; Fungi - 130; Plants - 461; Viruses - 1; Other Eukaryotes - 699 (source: NCBI BLink).
Link
InterPro Scan - TAIR