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Mutant Lines
GT19205

GT19205

CSHL Arabidopsis genetrap mutant lines

Original: GT19205

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT19205

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 1426546 [Map]; Strand: c
  - AT1G05000.1 - [+] show detail - Phosphotyrosine protein phosphatases superfamily protein
    Distance: 0; Region: intron2 (CDS)
  - AT1G05000.2 - [+] show detail - Phosphotyrosine protein phosphatases superfamily protein
    Distance: 0; Region: intron3 (CDS)
Flanking Genome Sequence: GT19205 - 3-prime edge
```
TTTTACCCAC CATTACCAAC CGTTTTCATC CCTAAACTTC CAAGCCATAT 
TTTATTATTA TGACTTTACC AAAAAAAGAA CACATCTTTC TTTATTGCTT
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 1426476 [Map]; Strand: c
- AT1G05000.1 - [+] show detail - Phosphotyrosine protein phosphatases superfamily protein
  Distance: 0; Region: intron2 (CDS)
- AT1G05000.2 - [+] show detail - Phosphotyrosine protein phosphatases superfamily protein
  Distance: 0; Region: intron3 (CDS)

TTTCTCCCTG CTTGGAACAG AGTGCCCATG AAGGATCAAA TTCAAGAGAA 
AGAAACACAG AAACAGTGTT AGTAGTCTAA AGTAAACAAC AATGAGACAG 
GATTTTCAAG AACAATTAGG CAATAAATAT CAAGCAAATA AAACCCTTCA 
AATTGAATGA ACTATGATAT ATTCCAGAAA TAGTATCGAG TTCCAGTTAA 
TATATGTAGG GTGTACCAAA GTTTTCGAAA GTCCATTAGT TAAGGGACCC 
TGTTTCTGAT GCTTAGAACT CCATAAATGC AAGGAAATCT CGTTGGCTAA 
GTCAGGAACA CGCTGCAGCA AGATATGATT TTTCCATTCA GA

AT1G05000.1

Model type: Protein coding
Short Description: Phosphotyrosine protein phosphatases superfamily protein
Computational Description: Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT2G32960.1); Has 669 Blast hits to 655 proteins in 149 species: Archae - 0; Bacteria - 50; Metazoa - 4; Fungi - 355; Plants - 145; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G05000.2

Model type: Protein coding
Short Description: Phosphotyrosine protein phosphatases superfamily protein
Computational Description: Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT2G32960.1); Has 580 Blast hits to 572 proteins in 119 species: Archae - 0; Bacteria - 14; Metazoa - 1; Fungi - 314; Plants - 145; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink).
Link: InterPro Scan - TAIR