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Mutant Lines
GT19237

GT19237

CSHL Arabidopsis genetrap mutant lines

Original: GT19237

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19237

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 1563785 [Map]; Strand: w
- AT4G03520.1 - [+] show detail - Thioredoxin superfamily protein
  Distance: 0; Region: intron1 (CDS)
- AT4G03520.2 - [+] show detail - Thioredoxin superfamily protein
  Distance: -390; Region: promoter

TGAAGCTCAG GAAACTACTA CCGATAGTAT GTTTTCTCAC TATTCCTTTT 
CCGATTTTTG GTTATTTACT GGTCTTGATT CGTGCTTGTT GATTGATTTT 
GAGAACTGAT TATTGATTTG TGTTAGGGAA ATTAGAATTT TAGGTGCTTG 
AATTTGTGTT GTTGTTCTTG TTGTACGCAT TTAGTAATCT GCTAAAAATT 
TGAGATTAGT TACAGATTAG TGAATCTGGA GGAAGAAGAG TTTCTTTAGG 
AGAGTATACC TTTTGAGAAA ATTCTTGCTG AAAATGAGGT TTCTGTTAGA 
GGAACGATTC ATGCTAATTG CGTGAAATTT GAAGAAAGTT GCATTTTAGG 
ATCTCTTCTT TTTTTGTGGA TATATGAAAA ATCTCTCTAA CAAACGTAGA 
AATTAGGTTG GGTACCTACT CAGATATTTT ATTGGTTGGA TCATACAAAT 
TGTGACCAGA AAGCCA

AT4G03520.1

Model type: Protein coding
Short Description: Thioredoxin superfamily protein
Curator Summary: chloroplast localized thioredoxin, similar to prokaryotic types.
Computational Description: ATHM2; FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 20603 Blast hits to 19509 proteins in 2977 species: Archae - 276; Bacteria - 10688; Metazoa - 2669; Fungi - 1127; Plants - 1883; Viruses - 7; Other Eukaryotes - 3953 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G03520.2

Model type: Protein coding
Short Description: Thioredoxin superfamily protein
Curator Summary: chloroplast localized thioredoxin, similar to prokaryotic types.
Computational Description: ATHM2; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 9201 Blast hits to 9185 proteins in 2237 species: Archae - 146; Bacteria - 6732; Metazoa - 24; Fungi - 110; Plants - 264; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink).
Link: InterPro Scan - TAIR