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GT19256

CSHL Arabidopsis genetrap mutant lines

Original: GT19256

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19256

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16523566 [Map]; Strand: w
      • AT4G34590.1 - [+] show detail - G-box binding factor 6
        Distance: 336; Region: intergenic
      • AT4G34600.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: polle...
        Distance: -5659; Region: intergenic
    Flanking Genome Sequence: GT19256 - 5-prime edge 
    CTGCTTAGAA GAGACTTACG AAATTCAAAA CTTTTAAGAA TCTAGATGAA 
    TTGAGGGTTG GTAGGTTAAT GTTGTAATAA GAAGAAACCT TATTTTCTTT 
    TTGATCTGGA AAAAGATAAA CAACATATAA CATCTTACAT AAAATCCTTT 
    TATGTCTGAA GATCTCTCAG AATAAGAAAT GAAACTGTGC AGATTCTTGT 
    AAAATATTTT AAACTTATTT CTTGTGAATT TTGGAGATTT TTTTTGTGTG 
    CTAGACTTAT AGGTGAAATC ATAGCCTCTT GTATTCTTTG CTTTTACACA 
    TCATCTTTTA ATTGATTTTC TTATCTCAAA TTTCTTTTTG GGATTTTAAA 
    TTTCACAGTT CCATTTATCA CCAATAGATC CATATACAAG TACATCACAA 
    AATAATGGTT ATACTACATC GTGAGTAATA ATGGGAATCC TATTCTACCC 
    TTTTGGCAGA ACTATACTTT TTGTTGCTGG ATAGTTTGTT TTATATCCAT 
    TGATCACGGA TGG

AT4G34590.1

Model type
Protein coding
Short Description
G-box binding factor 6
Curator Summary
Encodes a basic domain leucine zipper (bZip) transcription factor bZIP11. Translation is repressed by sucrose. Directly regulates gene expression of ASN1 and ProDH2, which are enzyme-coding genes involved in amino acid metabolism.
Computational Description
G-box binding factor 6 (GBF6); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sucrose induced translational repression, negative regulation of translation, regulation of transcription, DNA-dependent, response to sucrose stimulus; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1778 Blast hits to 1778 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 2; Plants - 1730; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G34600.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16385.1); Has 17 Blast hits to 17 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR