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GT19259

CSHL Arabidopsis genetrap mutant lines

Original: GT19259

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19259

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14265682 [Map]; Strand: c
      • AT2G33730.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19259 - 5-prime edge 
    GAAGCGTCCA GATTCAAACC AGGTACGGTT CCTGATAGAC CCCCAAGACA 
    TAGTGACACT GTCTATATAA ATTGAGTCGA TAGGCTCTCT GGATTTGTTC 
    TTAAATTTCC CAGTGACGTT TACCTTTTGG GATTGATCTC ATGCGTGTGC 
    TTAGTCGCAT GTTTTATCTT TAAGATTCGT AGTTTGATAG TGAAGGAAGC 
    AGTAGCAAGT GTAATAGTTG AAACTTGAGT ACCTTTTTAA AACGATTTAG 
    TACTGGTCTT GTTCAAGAAA AGTATCTTTG ATTCTCTGCC TAATTTTTCC 
    ACATATATAT CTCCTCTTTG TGTTTTAAAT TGAAAATTGA TGCTCGAGAC 
    GATGCTAAGC AAGAGACAAC AATGCAATTT GGTTATGTGG AAAATGACTT 
    CGCGAACTCG ACCTTTCCTT TATCCTAAAA CACTAAGAGA ATGTGAAATA 
    TTCTTTTGTA ATATCTAATG CCCCGTGGTG GATTTGTCTA CAACTACTAT 
    GTTGCATTGT TATATGTGGG TTTGTAACAA AAAACTCAAC TACTTTTACT 
    TATAATGAGA GCAGGATTCT TTATTAACAC TTAAAACATA TAAAAACCAC 
    ATGAAACCAT AAAAAACAAC ACCGGTATAC TTAAAAAACA AAAACACATG

AT2G33730.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1); Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039; Bacteria - 55089; Metazoa - 31149; Fungi - 11223; Plants - 5926; Viruses - 327; Other Eukaryotes - 20921 (source: NCBI BLink).
Link
InterPro Scan - TAIR