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Mutant Lines
GT19272

GT19272

CSHL Arabidopsis genetrap mutant lines

Original: GT19272

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19272

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 11207302 [Map]; Strand: w
- AT4G20940.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
  Distance: 1022; Region: intergenic
- AT4G20960.1 - [+] show detail - Cytidine/deoxycytidylate deaminase family protein
  Distance: -4644; Region: intergenic

TTTCTCTCTG TCGACACGAG CTAGCGTTCC GAACTCGTCC GATGCGTTTT 
GCGTGCCAAT GACCTTTATT GGAGTTATCG TTTCGTTTGA AGGAGGCGTT 
CCTCTTTATA AAAACTCTGG TGTTTGTGCT GAGCTCGCTG TTTGAGAGGC 
AAGATTGCTC AAGCGGTGCC CGATCTAGAC GAAATCTTGA GCCGAGGTTG 
AGAAGATGAG TGGAAAGTAT GATAACTTAG TTGAACGTGC TTTTTCAGGG 
AGAAAAGAGC TTCGGGAGCG TCGGTTGGAG TATGTCGACC GTTGATAAGA 
TGGCGGAGCT CATCGAGAAG CGATTGAATC GGATCAAGAC CTATATTGAC 
GATACGAAGG TGGCGGAGCC AAAGTTTTTG AATTCTATCA AGTGTATGGA 
AACATCAAGA CTCTCGAGGC GTAGATTGAA GACGGCGAGG TGGAGATAAA 
GTCGAACGAG ATGATGTCAA GATTGGATGC GAACGTTGAA TTGTTGAAGG 
CTGAGGTGAC AACCTTTAAT ATTTGTGATC TCATGGTCGG AGGATTTGGC 
GTTTAAAGTC TGTTTGCCGA GCTCAGGTCT GAACTTTGTT ACTCTGCTTT 
GCTTCAGAGT AGCAAGGAAG ATGACGATCA CGCAGATGGA CGAGATGGTC 
AAGAAGGTCG AGTCGAGGAA CGAATCATTG ATCAGGTCGT CTTGCAAGAT 
GAGAC

AT4G20940.1

Model type: Protein coding
Short Description: Leucine-rich receptor-like protein kinase family protein
Computational Description: Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: signal transduction, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G10020.1); Has 124696 Blast hits to 48167 proteins in 1508 species: Archae - 53; Bacteria - 7002; Metazoa - 34401; Fungi - 1693; Plants - 72944; Viruses - 23; Other Eukaryotes - 8580 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20960.1

Model type: Protein coding
Short Description: Cytidine/deoxycytidylate deaminase family protein
Curator Summary: encodes diaminohydroxyphosphoribosylaminopyrimidine deaminase catalyzing the second step in the riboflavin biosynthesis
Computational Description: Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, diaminohydroxyphosphoribosylaminopyrimidine deaminase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Riboflavin biosynthesis protein RibD (InterPro:IPR004794); BEST Arabidopsis thaliana protein match is: cytidine/deoxycytidylate deaminase family protein (TAIR:AT3G47390.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR