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GT19326

CSHL Arabidopsis genetrap mutant lines

Original: GT19326

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19326

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 147846 [Map]; Strand: c
      • AT2G01280.1 - [+] show detail - Cyclin/Brf1-like TBP-binding protein
        Distance: 0; Region: intron12 (CDS)
    Flanking Genome Sequence: GT19326 - 5-prime edge 
    TCCAAATAGT CAGCATGTCT TTCACCCCCA TATGTTTCTC CTTCGCCTTT 
    CTCTGCGCAC AAAAGATTCT CAAGAGCTCT AACGATAGCA AATAAAAATT 
    TTAAGCTGAT AAGTGATAAG ACATGAAGTA AACTCACCCG AACATTGTTT 
    TGCCCTTTTG CTTACATTAA CTTGTTTAGG GATGAAAGCA GGGATGGGAA 
    AATCCCGTAC CGACCG

AT2G01280.1

Model type
Protein coding
Short Description
Cyclin/Brf1-like TBP-binding protein
Computational Description
maternal effect embryo arrest 65 (MEE65); FUNCTIONS IN: RNA polymerase II transcription factor activity, cation:chloride symporter activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670), Brf1-like TBP-binding (InterPro:IPR011665); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT3G09360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR