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GT19563

CSHL Arabidopsis genetrap mutant lines

Original: GT19563

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19563

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26675519 [Map]; Strand: c
      • AT1G70740.2 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: intron1 (CDS)
      • AT1G70740.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT19563 - 5-prime edge
    GAGGTAAGAT CCGTTTGATT TGTTGATTCT TAGTGTAAGA TTAGGTTTTT 
    GTGAAATTTG ACTAACTTTT TCTTCGTTGA CTTAAAGGTC TTGAAGATGA
    TATTGAGCGA ATTGCTGCTA TGGAGCAAAA AGTTTTCCCA TTTCAAGTTT
    TAGTTTCCGC TACCAAAGAT TTTCACCCGA CCCATAAACT CGGTGAAGGT
    GGTTTCGGTC CCGTCTTCAA GGTAACCCTA ATTTTGACAT ACCCAGAGCT
    TAAAGTTTCC ATTTTTAGGG TTGTGGTTGT ATAATTGTGT GTGTGTGTTT
    TCGTGGGTTT TGTTAGTTTG GCTGATGAGG TTGATTGGTG TGTAATAGGG
    AAGATTACCT GACGGGAGAG ACATAGCAGT GAAGAAGCTA TCTCAGGTTT
    CAAGGCAAGG CAAAAACGAG TTTGTGAACG AGGCTAAGTT GTTGGCTAAA
    GTTCAGCATC GCAATGTTGT TAATCTTTGG GGTTATTGTA CACATGGAGA
    TGATAAGCTC TTGGTTTATG AGTATGTCGT TAATGAGAGC CTCGACAAGG
    TCCTCTTCAG TAAGTTTTTC T

AT1G70740.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (TAIR:AT4G23180.1); Has 118680 Blast hits to 117148 proteins in 4511 species: Archae - 101; Bacteria - 13535; Metazoa - 44165; Fungi - 9939; Plants - 33069; Viruses - 411; Other Eukaryotes - 17460 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G70740.2

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (TAIR:AT4G23180.1).
Link
InterPro Scan - TAIR