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GT19573

CSHL Arabidopsis genetrap mutant lines

Original: GT19573

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19573

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 562136 [Map]; Strand: w
      • AT4G01350.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19573 - 5-prime edge 
    TTGCATGCTC AGTGTGTATT AGGAGATTTC TCACGTCTCG CGCTAGGACA 
    AAACTATTGG TTTGGGGAAA AAGGTATCAA GTTTGAGGCA GTTCCTAACA 
    ATCACAACAC TCGGCCATTA TGCATCCAAT GTCAATCTCG ATGCAATGTC 
    TCCGTCATCC TAAAGAAAGG TAATGAAGAC AATCGGTATA TATGTTCCCG 
    TTCATCTCTA TCGACTAATT TGGGTCAAAA AATTTGAACT TATGTTTAAT 
    GATATAATGA GTGGTTCTAG ATATCATGAC TGTATTATTT CATTAGCGTT 
    TCTATTTTTA TTTCCAAGAA AAGATATGTA ATATAGATTT ATTTTTGTTT 
    TCTAATAAAA GATGCTTATT TATCAAGAAA GTAGATACTA TCATCATGAT 
    CATTGTTATA CGAGAGCATG ATCACATAAT GAACAAAAGA GATGAAATTA 
    AGTTCAAAGC AGTAACAAAG GAAACTAAAC AAAATTGGTC TAAAGATAAT 
    GGTTTTGACC GGGTTCGAAC CGGAAACCTT TGGTGTGTTA AACTGACGTG 
    ATAACCAACT ACACCACGAA ACCTGTATGC TTCTGCCCAA AGTCTTTATT 
    ATTACCCTAA TTATTTGTTA ATCTGCATAG TTAGGGTTTC TGGAATCTAG 
    CATCGTTTTA ACTGAATGGA TTCAATCCTC AAACGT

AT4G01350.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G59920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR