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GT19589

CSHL Arabidopsis genetrap mutant lines

Original: GT19589

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19589

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14692724 [Map]; Strand: c
      • AT2G34825.1 - [+] show detail - RALF-like 20
        Distance: 1095; Region: intergenic
      • AT2G34830.1 - [+] show detail - WRKY DNA-binding protein 35
        Distance: 1032; Region: intergenic
    Flanking Genome Sequence: GT19589 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    AATTACGTAC GTGATTTTTA TTTTAACATA TAGGTTTTGA TTTTACAGTT 
    TTTTTTTCTT TTTTTTTAAC ATGCCACTGT AAATGATTTA CACATAAATT 
    CCGTTAGCGG TAAACCGTGA ACGCTAGCCG TAACAGTCAG ATCAGTTCAA 
    GACTATATGG ACAAATACTT ATTGAAAACA AATTACTATA TCTCAATAAC 
    ATTAATTACT TATTCTATTC TGTAAGACTG TTGTGTAACG CATGAATATA 
    GCAAGGAAGC AGCAAGGTAT AAGACACGAT TTACGTTATA AAAAAAAAGT 
    TTTTTTGTAC AATAGTTTAA ACGGCTCTGT TTAACGGGGC AAATTTGTTT 
    TTTTTTGGTC CCCTTCCCCA AAAAATTTAA AAAACCTTCT TTTTCTTGGC 
    CCCAGGCCAA AATATTTTAA AACCCTTTTT TATTCCAGGG TGGAAAATAA 
    TAAGGGATCC CCTTTAAATC CCCCCCGAAA AAAAACCCTT AAACCCAAAT 
    TTTTTTTCTG GCTTCCCAAA ATCTCCCCCA GGCTTGGCCA AACAAAAAAA 
    TTTTCCCTTT ACCAAAAAAA AAAAATTTTT TTCCCCTTCC TTAACCATTT 
    TTTT

AT2G34825.1

Model type
Protein coding
Short Description
RALF-like 20
Curator Summary
Rapid alkalinization factor (RALF) family protein. Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
Computational Description
RALF-like 20 (RALFL20); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: Rapid alkalinization factor (RALF) family protein (TAIR:AT2G32885.1); Has 39 Blast hits to 39 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G34830.1

Model type
Protein coding
Short Description
WRKY DNA-binding protein 35
Curator Summary
member of WRKY Transcription Factor; Group II-e
Computational Description
WRKY DNA-binding protein 35 (WRKY35); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 14 (TAIR:AT1G30650.1); Has 5047 Blast hits to 3028 proteins in 237 species: Archae - 0; Bacteria - 12; Metazoa - 64; Fungi - 63; Plants - 3289; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink).
Link
InterPro Scan - TAIR