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GT19590

CSHL Arabidopsis genetrap mutant lines

Original: GT19590

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19590

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8869855 [Map]; Strand: c
      • AT2G20590.1 - [+] show detail - Reticulon family protein
        Distance: -627; Region: promoter
      • AT2G20590.2 - [+] show detail - Reticulon family protein
        Distance: -599; Region: promoter
    Flanking Genome Sequence: GT19590 - 5-prime edge 
    CTTTCTCCCC GATTGGTGGC TTTCCGATAT ATTAGGCGAC CCCGTAGAAA 
    ACCTCCATGG AATCAAATCA TAAGAGCCTT GCATTTCTGG TCTTTGAAAA 
    ACGTCAACAA CAGAATCGAG ATCATGGATT TATCATAGAC AATATTTACA 
    ACCAAAACAA TGCCACTGTC TCACGCGTGT GATGGAAATA ATTATATATT 
    TTACAATGTA ACTAATGGAT CACAACCTTT CGGTTTTCGA AAAACGTGTT 
    GGAATTTCAC TAAAGAGATG ATAACCAAAC AAGAAGATCA AATTAGATCG 
    AAGACGAAGA CGATCAATGA AAATAACAGA TTGATCACTC TGTTAGCGTG 
    TAAGGCTTAC CTAAGAAAAG AAGCAACGTA TAATTTCAAT GTTTCGATTA 
    TTTCATTCAA CTTAAGTATT GGTTTTATGG ATTGTAGAGC TTTCATTTGT 
    ATGCTCATTG ATATATTTGT AATCTCTTTT TAAGTTTATT ATAATTATAA 
    TAACATTTTC AAACCGTTAT GAAGTTAAGA ATAATAACTA GTATCTCTGT 
    AAATGCCAAA ATGTCTTAAA AGTCTTGTAA ATGGAATCAA CAACAAAAAA 
    ACACTCACA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8869842 [Map]; Strand: c
      • AT2G20590.1 - [+] show detail - Reticulon family protein
        Distance: -614; Region: promoter
      • AT2G20590.2 - [+] show detail - Reticulon family protein
        Distance: -586; Region: promoter
    Flanking Genome Sequence: GT19590 - 5-prime edge 
    TGGTGGCTTT CCGATATATT AGGCGACCCC GTAGAAAACC TCCATGGAAT 
    CAAATCATAA GAGCCTTGCA TTTCTGGTCT TTGAAAAACG TCAACAACAG 
    AATCGAGATC ATGGATTTAT CATAGACAAT ATTTACAACC AAAACAATGC 
    CACTGTCTCA CGCGTGTGAT GGAAATAATT ATATATTTTA CAATGTAACT 
    AATGGATCAC AACCTTTCGG TTTTCGAAAA ACGTGTTGGA ATTTCACTAA 
    AGAGATGATA ACCAAACAAG AAGATCAAAT TAGATCGAAG ACGAAGACGA 
    TCAATGAAAA TAACAGATTG ATCACTCTGT TAGCGTGTAA GGCTTACCTA 
    AGAAAAGAAG CAACGTATAA TTTCAATGTT TCGATTATTT CATTCAACTT 
    AAGTATTGGT TTTATGGATT GTAGAGCTTT CATTTGTATG CTCATTGATA 
    TATTTGTAAT CTCTTTTTAA GTTTATTATA ATTATAATAA CATTTTCAAA 
    CCGTTATGAA GTTAAGAATA ATAACTAGTA TCTCTGTAAA TGCCAAAATG 
    TCTTAAAAGT CTTGTAAATG GAATCAACAA CAAAAAAACA CTCACAGTTT 
    CTTC

AT2G20590.1

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT4G28430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G20590.2

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT4G28430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR