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GT19652

CSHL Arabidopsis genetrap mutant lines

Original: GT19652

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19652

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16709712 [Map]; Strand: w
      • AT4G35100.2 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: 0; Region: exon3 (CDS)
      • AT4G35100.1 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT19652 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTTGTAG 
    ATAACAGCAG CACCAAAGCT TCTAGCTGGG TTGATACCAG TTCCAGTAAT 
    GGGGATAGTA GCCAAATGCA CCATGAACAC AGCAAATCCA ATTGGAAGTG 
    GAGCCAAAAC CTAATCACAA GAAAACCCAC CACACTTTAT CAGAATCTAC 
    AAAGTAAAGA TCCTTAGAGA TTCATACATA CTTTGTCATT ACACCATAAA 
    AAGATTCAAA CTTCATCAGA ATCTACAAAG ACCCATTTTA TATTCATACT 
    AACTTTATCA TTAAATCCTA AAAAGATTCA ACCTTTATCA TAATCTACAA 
    AGACCCAATT AGATTCATAG TAACTTTGTC AAAAAACTCA ATTAAAGATT 
    CAAGCTTTTT GAGACTTACG GGGATGTGAG AGTCACGAGC GCTTCTCTTA 
    GGGTCAGTTG CAGAGAAAAC GGTGTAAACA AGAACGAAAG TTCCAATAAT 
    CTCAGCTCCG AGAGCAGTTC CTTTGCTGTA ACCGTCAGCT ACGGTGTTAG 
    CTCCTCCACC AAGAGTGTTG TAAGGAGTTT TCATGAAAGC TTTCACGAAA 
    CCCACACCAC AAATGGCTCC AAGACACTGA GCTATCATGT AACCAAGAGC 
    TCGCACCAAA GAGACCTTAC GGGCCAAGAA CAGACCGAAA GTCACAGCTG 
    GGTTAATGTG ACCACCTACG AGAAGACGAG AACAAGAACG AGATTAACAA 
    TAAAACCAAC GAACCAAACA AGTAAAAAGT AGGGGTTTTT TGGTGGGGAT 
    TCAAACTTAC C

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16709774 [Map]; Strand: w
      • AT4G35100.2 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: 0; Region: intron3 (CDS)
      • AT4G35100.1 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT19652 - 5-prime edge 
    ACTTTCTCCC TGTCTACACA ACGAGAAGGC GTGGGATGAC CAAGTAAGTG 
    TTTAGTTATT ATCTGGATTA GGTATTCACT AATCATTCAT GACTTCATGT 
    CCTAATGTTG GTTCTGTGTT GGTTTTGGTT TTGCAGTGGA TCTTTTGGGT 
    TGGTCCGTTC TTGGGAGCAC TAGCTGCAGC AGCTTACCAC CAATACATAT 
    TGAGAGCTTC AGCAATTAAG GCCTTGGGCT CGTTCCGAAG CAACGCAACC 
    AATTAATGAA GGCTTTTTTT AAGATAATGT CAAGAAACAA CTTTAAGATT 
    TATATGCTTT AATTATTATT TGTTGTTCTT TTGTGTGTAA TGAGAGAGAT 
    GGTGGATTGA TGTTAATTAT GAAATGGCTC AGTGACTTCT ATTTCCTTCT 
    TTAGTTTTTG ATTGTCTTTG TTAATCGTTT GCCTTTGGTT TCTCTTAGTA 
    GTTACAAATT CATGTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16709814 [Map]; Strand: w
      • AT4G35100.2 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: 0; Region: intron3 (CDS)
      • AT4G35100.1 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT19652 - 5-prime edge 
    CAAGTAAGTG TTTAGTTATT ATCTCGTTTA GGTATTCACT AATCATTCAT 
    GACTTCATGT CCTA

AT4G35100.1

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 3
Curator Summary
a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP
Computational Description
plasma membrane intrinsic protein 3 (PIP3); FUNCTIONS IN: water channel activity; INVOLVED IN: response to salt stress, transport; LOCATED IN: anchored to plasma membrane, nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: guard cell, cultured cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;8 (TAIR:AT2G16850.1); Has 10883 Blast hits to 10871 proteins in 2222 species: Archae - 81; Bacteria - 5172; Metazoa - 1469; Fungi - 457; Plants - 2516; Viruses - 2; Other Eukaryotes - 1186 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35100.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 3
Curator Summary
a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP
Computational Description
plasma membrane intrinsic protein 3 (PIP3); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;8 (TAIR:AT2G16850.1).
Link
InterPro Scan - TAIR