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GT19661

CSHL Arabidopsis genetrap mutant lines

Original: GT19661

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19661

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18634447 [Map]; Strand: c
      • AT2G45190.1 - [+] show detail - Plant-specific transcription factor YABBY family protein
        Distance: -3735; Region: intergenic
      • AT2G45200.1 - [+] show detail - golgi snare 12
        Distance: 3056; Region: intergenic
    Flanking Genome Sequence: GT19661 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT AGTAAAGACA 
    TTGAGAAGAG AGTACTACTT GTATTAGTTA AATATACAGT AGTTTGAACC 
    ATTCTAGTTC CGAATAGTAA AAGTATGTAC GCATCTATAA GATCAGAAAC 
    TCTGTTGTTT ACAAAATTAA TAAAAACAAA AATGTGCCTA TGCTTGCTAC 
    TTGGCAGGGA TGAGTTAGAA ATGGGCTGTT GCGCAGAACA AAGAATAATG 
    GCTTTTCAAA GTATCATATT TTTTATATAT ACACACATTC CTATATACAT 
    ACATAGATGT GTGTGAATAA AGCATTTACT TATTCTGTGC TTGAAAAAGG 
    TATCAGATAT GAAGACTATA GGGTTTCTCC AGTTCTATTT TCTATCTTCT 
    TTTTATACAA AAACTACGAT TCTGAAAATC TTATTCAATT ATTAAAAAGC 
    AAATGGGTTT TTGTAAGATT CCGCTTTCTA CATAATTCTT ATATAATTGG 
    CCTGAGTAAA TTATAGAGTA ACAAATTCTC GGATATCAAG GAGAGCGACA 
    GTGTGGGTAA AACAAAATTT ACGAGTGGGT TCAAACTCTG AAAGTGAGTA 
    AAAAAGAGAA CGATGTTCAC ATGTACATGC ATTTTATTTC NNTTTTGTCA 
    ACAATATAAA ATACTTGAAT TTAAATATCC TGATGTTGAT ACTTCACCCA 
    TACTAATACA AACCACTAGA TTATATACTT TGGTCACGTA TTAAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18630656 [Map]; Strand: c
      • AT2G45190.1 - [+] show detail - Plant-specific transcription factor YABBY family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT19661 - 5-prime edge 
    CCTACTTTCT CCCTGCAGCA ACCCACAATC AAGAAGATCA GATCATGGTG 
    GGGTTTTTTA TTTTCTCCTT ATCAAGAATC CTCTGATCAG TCAAATACCC 
    ATCAATCAAT CAAATCCCCA AACACTCCCA AAAAAAGATC AGCTTCCAAT 
    ATTTTTCCCC TTCTTACAAA AAAGATGTCT ATGTCGTCTA TGTCCTCCCC 
    TTCCTCAGCT GTTTGTTCAC CGGACCACTT CTCTCCTTCC GACCATCTCT 
    GCTATGTCCA ATGCAACTTT TGCCAAACCA TCCTTGCGGT ACAAAATAAC 
    CTCTCTTCAA TACTTTCTCT CTCATTTTTT CTCCTCCAAC TTCTCATCTT 
    CTTGATCTAT ACAAGATTAG GGGTTTTTTA AATTCATTGT TTCTTTTGTG 
    TGCTTATAGG TTAATGTTCC TTACACAAGC TTGTTCAAGA CCGTAACTGT 
    CCGATGTGGT TGCTGTACCA ATCTCCTTTC GGTGAACATG AGATCATATG 
    TCCTCCCAGC TTCTAACCAG CTCCAGCTCC AGCTCGGTCC TCACTCTTAC 
    TTCAATCCCC AGGATATTCT GGTACTTAAA CAAAATTCAA ATACATAATC 
    TTATAGGGTC TCATTTAGCT TATTGGAAGT AATCTCAAGC CTCAAGGATA 
    TAAATATTAT TGTAGGAGGA GCTGAGAGAT GCACCGTCTA ACATGAATAT 
    GATGATGATG AATCAACATC CTACTATGAA TGACATACCA TCTTTCATGG 
    ATCTTCATCA ACAACATGAG ATTCCTAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18630600 [Map]; Strand: c
      • AT2G45190.1 - [+] show detail - Plant-specific transcription factor YABBY family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT19661 - 5-prime edge 
    TTTTATTTTC TCCTTATCAA GAATCCTCTG ATCAGTCAAA TACCCATCAA 
    TCAATCAAAT CCCCAAACAC TCCCAAAAAA AGATCAGCTT CCAATATTTT 
    TCCCCTTCTT ACAAAAAAGA TGTCTATGTC GTCTATGTCC TCCCCTTCCT 
    CAGCTGTTTG TTCACCGGAC CACTTCTCTC CTTCCGACCA TCTCTGCTAT 
    GTCCAATGCA ACTTTTGCCA AACCATCCTT GCGGTACAAA ATAACCTCTC 
    TTCAATACTT TCTCTCTCAT TTTTTCTCCT CCAACTTCTC ATCTTCTTGA 
    TCTATACAAG ATTAGGGGTT TTTTAAATTC ATTGTTTCTT TTGTGTGCTT 
    ATAGGTTAAT GTTCCTTACA CAAGCTTGTT CAAGACCGTA ACTGTCCGAT 
    GTGGTTGCTG TACCAATCTC CTTTCGGTGA ACATGAGATC ATATGTCCTC 
    CCAGCTTCTA ACCAGCTCCA GCTCCAGCTC GGTCCTCACT CTTACTTCAA 
    TCCCCAGGAT ATTCTGGTAC TTAAACAAAA TTCAAATACA TAATCTTATA 
    GGGTCTCATT TAGCTTATTG GAAGTAATCT NCAGCCTCAA GGATATAAAT 
    ATTATTGTAG GAGGAGCTGA GAGATGCACC GTCTAACATG AATATGATGA 
    TGATGAATCA ACATCCTACT ATGAATGACA TACCATCTTT CATGGATCTT 
    CATCAACAAC ATGAGATTCC TAAAGCACCA CCCGTTAACC GCCGT

AT2G45190.1

Model type
Protein coding
Short Description
Plant-specific transcription factor YABBY family protein
Curator Summary
Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).
Computational Description
ABNORMAL FLORAL ORGANS (AFO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT4G00180.1); Has 454 Blast hits to 452 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 436; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G45200.1

Model type
Protein coding
Short Description
golgi snare 12
Curator Summary
Encodes a member of the GOS1 (Golgi SNARE) gene family.
Computational Description
golgi snare 12 (GOS12); FUNCTIONS IN: SNARE binding; INVOLVED IN: cellular membrane fusion, intra-Golgi vesicle-mediated transport; LOCATED IN: cytosol, integral to membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: golgi snare 11 (TAIR:AT1G15880.1); Has 416 Blast hits to 416 proteins in 175 species: Archae - 0; Bacteria - 4; Metazoa - 145; Fungi - 132; Plants - 101; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link
InterPro Scan - TAIR