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GT19664

CSHL Arabidopsis genetrap mutant lines

Original: GT19664

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19664

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19658041 [Map]; Strand: c
      • AT1G52780.1 - [+] show detail - Protein of unknown function (DUF2921)
        Distance: -602; Region: promoter
    Flanking Genome Sequence: GT19664 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTT 
    CGAAGAAAAC AACAAAGACT TGAGAAGAAA ACTAAAGTAA GTCGAGGTCA 
    ATGACTAATG GGATCTCACT TAAAACATAT CCCGTCGAAC ACGCCTCTTC 
    CATCTTTAAA GTCAAGTCAA CCACTCACGC ATAAATTTAT TGAACCAACC 
    ACTAAAAATT GTGATAACAA TCATTTATAT TTAGATAAAT CATTTTATTT 
    ATTCAAAACT TTGTTATGCG CTAATTACTA TTAATATCTA ACCAATTAGT 
    CAGGATTTTT CGTATTTTTT AACATGACCT AAATATAGAT ATAAATTTAG 
    AAATATAATG TTAATGATTA ATTTTTTTTC ATTCTTATTA ACTATATAGT 
    TAGACAACGG AAAACATCTG AGATGATTAG TTGAGGGTCT ATGAAAAATA 
    TCAAATATAT ATATATATAT ATAATTATTT TCAGCATTAA TATTTATTTA 
    CTGGAAAAAA ACAATGCAAA TGTTGGAGTA AATTAAAAGA AAAATAATTA 
    AGGGGAACTA ATTGTTCAAA TAAATTAAAA GAAAATTCCA AAGACTTTTC 
    TCTGTTCACT GTTCTGCTTA ACTTCGAGTG TAATTGTCTC TCTCTCGATC 
    TGTGTCATCG TCACTAGTGA TGTAACTTCT TCACCAAATC GAATATTACA 
    GAGAACCCAT ACATC

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT19664 - 5-prime edge 
    CTTGGATAAG ATAAACACCA ATGTGAAACT TG

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19657961 [Map]; Strand: c
      • AT1G52780.1 - [+] show detail - Protein of unknown function (DUF2921)
        Distance: -682; Region: promoter
    Flanking Genome Sequence: GT19664 - 5-prime edge 
    AAGATACGTC AATTTCATTC GTACATATAT AGAAGATAAT TTAGAAGTAG 
    CCTTTTTCAA CGACAAATAT TTTGGGCTTG ATATTGTTTG GGCCGAAATA 
    TTTGGCCCAA AGAGCCGCTA TAGCTAATGC AGGTTTATAG ATAGCAGCTG 
    AGGCTGAAAG TGAAAGACAA AAAGCATTAG GAAATTGAAG AGGAACAAAC 
    CAAGACAGTG AGAAACCAAA GAAAATGTCT TAAAACCTAT TGTAGACTTG 
    TAGTGTTTCG AAGATAAAAA ACTAACTGAT GATAAAACAG AGAAACAAGA 
    TGTACAAGAA TCTAAGATTC TAAGAGAGTC TTGGATAAGA TAAAAACCAT 
    TGTGAAACTT GACCCACAAG CCATCGATAT GACTATATGA GCTTACAAAA 
    TGTACAAAAT ATTAGATTCA GACACAAAGA CTGAAGAACA AATGCACAAG 
    AAGGCAACAA CAAGAACAGA AACTAAAGAC GGTTTTTCAA GACATAGATT 
    TTCTCCACCT AGAAGGTGTT CTTCCTTTAA CAAGCTTTGT CATCATATTA 
    CCAGGCGTTT GAGTCACATA CTCAAAATTT TCACCTTCTC CATTATTACC 
    AAACTCTTCA CCATTCGTGT TTTCCACAAC GCTAACGCTT AAACCGCTCC 
    TAAATCCCAA CTTCTTCCAC CTAAAAAAAC CTTTATTCCC ACTAGTAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19657961 [Map]; Strand: c
      • AT1G52780.1 - [+] show detail - Protein of unknown function (DUF2921)
        Distance: -682; Region: promoter
    Flanking Genome Sequence: GT19664 - 5-prime edge 
    AAGATACGTC AATTTCATTC GTACATATAT AGAAGATAAT TCCCAAGTAG 
    CCTTTTTCAA CGACAAATAT TTTGGGCTTG ATACTGTTTG GGCCGAAATA 
    TTTGGCCCAA AGAGCCGCTA TAGCTAATGC AGGTTTATAG ATAGCAGCTG 
    AGGCTGAAAG TGAAAGACAA AAAGCATTAG GAAATTGAAG AGGAACAAAC 
    CAAGACAGTG AGAAACCAAA GAAAATGTCT TAAAACCTAT TGTAGACTTG 
    TAGTGTTTCG AAGATAAAAA ACTAACTGAT GATAAAACAG AGAAACAAGA 
    TGTACAAGAA TCTAAGATTC TAAGAGAGTC TTGGATAAGA TAAAAACCAT 
    TGTGAAACTT GACCCACAAG CCATCGATAT GACTATATGA GCTTACAAAA 
    TGTACAAAAT ATTAGATTCA GACACAAAGA CTGAAGAACA AATGCACAAG 
    AAGGCAACAA CAAGAACAGA AACTAAAGAC GGTTTTTCAA GACATAGATT 
    TTCTCCACCT AGAAGGTGTT CTTCCTTTAA CAAGCTTTGT CATCATATTA 
    CCAGGCGTTT GAGTCACATA CTCAAAATTT TCACCTTCTC CATTATTACC 
    AAACTCTTCA CCATTCGTGT TTTCCACAAC GCTAACGCTT AAACCGCTCC 
    TAAATCCCAA CTTCTTCCAC CTAAAAAAAC CTTTATTCCC ACTAGTACAA 
    GTTCCTTTC

AT1G52780.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF2921)
Computational Description
Protein of unknown function (DUF2921); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: cultured cell, callus, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2921 (InterPro:IPR021319); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2921) (TAIR:AT4G21700.1); Has 114 Blast hits to 99 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR