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GT19711

CSHL Arabidopsis genetrap mutant lines

Original: GT19711

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19711

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12345922 [Map]; Strand: c
      • AT4G23700.1 - [+] show detail - cation/H+ exchanger 17
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT19711 - 5-prime edge 
    GGAACAGAAC ATGAGGCATA GCGGTTTGTT TGAACGGTTC ATCTCTCTCG 
    ACTATCGGTT CTTATAATCA GCTTTGGTTA AGGATTTACC CGGTTTGTAC 
    ACCGCTAGAA CTAGAGGAGT CGTCATGAAT GTGGTGAATA TCGCCATTAG 
    AACCATTATA GCGAAAATTT GATCGTTTAG AACCTGTGAC AACACATCAA 
    AAAATTAAGT AAATATGCAA ATATTTTTTG TACAAAATGA GTTTTACTCT 
    GTAATTAATG TATCATGATA ATGTTTGATA AATGAATCAA AAGTCTTAAA 
    TCGCTTCACG TGCTATTTTA ACTTACCACA ATGACTTATT CTCTCATCAT 
    TTGTCAGATC TTTAAAGCAT GGGAACAAAC GGTACAACAT GTCCAGGACC 
    AATGAAAGCA ACCTCTAATG GAGTCGTTGA GGGAGAGAAT CCTCTGGAAC 
    ACGCGTTGCC TCTTCTCATA CTCCAGATCT GTATCGTTCT TCTTCTCTCT 
    CGA

AT4G23700.1

Model type
Protein coding
Short Description
cation/H+ exchanger 17
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 17 (CHX17); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: N-terminal protein myristoylation, cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10581 Blast hits to 10541 proteins in 2184 species: Archae - 402; Bacteria - 8255; Metazoa - 59; Fungi - 207; Plants - 679; Viruses - 0; Other Eukaryotes - 979 (source: NCBI BLink).
Link
InterPro Scan - TAIR