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GT19733

CSHL Arabidopsis genetrap mutant lines

Original: GT19733

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19733

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT19733 - 5-prime edge
    TTTTAAACTT TCCCAACCTT TT
  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 400690 [Map]; Strand: w
      • AT5G02040.1 - [+] show detail - prenylated RAB acceptor 1.A1
        Distance: -209; Region: promoter
      • AT5G02040.2 - [+] show detail - prenylated RAB acceptor 1.A1
        Distance: -209; Region: promoter
    Flanking Genome Sequence: GT19733 - 5-prime edge
    GAAGTGGGAT ATGATTTGAT ACATATAGTC TAAAATATGA TTTTATGCCA 
    GTAATATTTT GTTTTCCCTG TCCCCTACCT ATATCTAGAG CTTGAGATCC
    TCCTTTTAAA ACTTTTAGAT GATTAATCGT TTTACAAATC ATAGTCCCAG
    ACTTTCGTTC CAATCTAGAT CGGTTTAGAT GCGTTTTGTT TTGGAATTTA
    TACAACGAAA ACCAAAGTTT AGATTAAAAG ATTCGAAAAC CGGATTACAT
    AAAATCTGGT CCAGGACCCC TTTGGTTAAC GAAAACCAGA CTAAAGGGCA
    GAAACGTCAT TGGACAAAAA GACGGATGAT TCTCTCCTTC CTCTTTCCCC
    AATGCAAAGA AAAAGCATTA TAGACTTTTC AAGTTTTCCG ATATAAGCAC
    GAAATCGCTG TTTCTCTCTT CGACGAAGCT TTGATAATTT CATCTCTCTC
    GGACCAATTC TATTGAGAAT TTGTGTACCT GTTTTCTTAT AAGGTTAACT
    AAGGATTGTG GAATCAGAAG TGTTGTGTTT TTGTGATCGG AGATTATGGA
    TTGGGGAAAC GTAACGGTTG ATGATCTCTT CGATGCTCTC CGAGAAGT

AT5G02040.1

Model type
Protein coding
Short Description
prenylated RAB acceptor 1.A1
Computational Description
prenylated RAB acceptor 1.A1 (PRA1.A1); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G11402.2); Has 236 Blast hits to 236 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 12; Plants - 110; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G02040.2

Model type
Protein coding
Short Description
prenylated RAB acceptor 1.A1
Computational Description
prenylated RAB acceptor 1.A1 (PRA1.A1); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G11402.2); Has 236 Blast hits to 236 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 12; Plants - 110; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR