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GT19737

CSHL Arabidopsis genetrap mutant lines

Original: GT19737

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19737

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 69447 [Map]; Strand: w
      • AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 0; Region: exon1 (CDS)
      • AT4G00165.2 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19737 - 5-prime edge
    TCTGAGTCTC GGAACGTTCT TTCTTTGATT AAGGGAGACA GAGCACACAT 
    AATAATATCA GCAGACGAAT CCCTGAGGAA CATTTTTGCC GCAAGAGTTG
    AGAAGCAGAG TGAGAGCAAC GGGAATTTTG ACAGGAGCAA CTCCGAGAAT
    GCTGGTTTTA AGTGCAGTGC ACAGACAAAC GGCAGCTTCA AAGTCAGCCA
    AACCTTTGAT GAGCGAGCAA CACTCCTGGC TCGGTGGTGT ACCGATGACC
    TCACTAACCA GACCTAACCA GCTCCCACAC ACTCCAAATT TGAGTGTGTC
    TCTTGGACAT TTCGTGGTGG CTTGTTTTGC GGGAGGGGGA GGGCATGGCT
    TGACGGTGGC TCCTGGTGTA ACATGGCCGA AGAAGAATGT TATGTTAAGG
    AGCAGCAAGA TGAGAAGAGA TCGCAAAGCT TTCGAGGTAC CCATTAGGTT
    TATCTTGAAA CTAGTGCTAT GTGATACCTA TGAGGAAGAA GAGAGGCCTT
    AACAATTTGC GTTCTTTCTT TGTTGGTGCC TTTATCATTG GGGCTTTGTG
    GACATAATTG TTTGTGTTAT CCCTAGTTCT GTAAAACGTA TTTGTCTTCT

AT4G00165.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: N-terminal protein myristoylation, lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00165.2

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 761 Blast hits to 755 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 761; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR