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Mutant Lines
GT19753

GT19753

CSHL Arabidopsis genetrap mutant lines

Original: GT19753

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19753

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 227598 [Map]; Strand: c
  - AT4G00500.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: -202; Region: promoter
  - AT4G00500.2 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: -403; Region: promoter
  - AT4G00520.2 - [+] show detail - Acyl-CoA thioesterase family protein
    Distance: -96; Region: promoter
  - AT4G00520.3 - [+] show detail - Acyl-CoA thioesterase family protein
    Distance: -96; Region: promoter
Flanking Genome Sequence: GT19753 - 5-prime edge
```
TCTGCTGACC AAACAATAAA AAATGCAACG AGGTAATTAT CCAGTACCCT 
TGGGTATACG ATAGAGTCTG TGGACACCGC TCAGATGCAG TGCTGACAAA 
TTTAATGGGC CTATAGCTAA AAGCCCAAAT TTGTTGGTCC TAAATCCTAA 
TACGCTGTCC TATAGAAAAC AAAAGTTTCT TCTACACTCA GCACAGATCC 
GACCCGACCC GACCCGACCC GACAGCTTCC GAAGACGAAA TTTCTACATT 
GCACGTCTTT CTCCGCTAGT CTCGAGGACA GGGATGAAAG TAGGATGGGA 
AAATCCCGTA CCGACCGTTA TCGTA
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 227516 [Map]; Strand: w
- AT4G00500.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: -120; Region: promoter
- AT4G00500.2 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: -321; Region: promoter
- AT4G00520.2 - [+] show detail - Acyl-CoA thioesterase family protein
  Distance: -178; Region: promoter
- AT4G00520.3 - [+] show detail - Acyl-CoA thioesterase family protein
  Distance: -178; Region: promoter

GGGTCCGGGT CCGGGTCCGG GTCCGGATCT GTGCTGAGTT GTAGAAGAAA 
ACTTTTTGTT TTCTATAGGA CAGCGTATTA GGATTTAGGA CCAACAAATT 
TTGGGCTTTT AGCTATAGGC CCATTAAATT TTGTCAGCAC TGCATCTGAG 
CGGTGTCCAC AGACTCTATC GTATACCCAA GGGTACTGGA TAATTACCTC 
GTTGCATTTT TTATTTTGTT TGGTCAGCAG AATTTTAGTT TGAATGATTG 
AATTTTGCCG GCCAACGTTT CGACAGTCTC TACACCGTCA TGAACACTGA 
ATCAGGTAAT TCCGAATATC TTTTTTTCTT TTGTTCTATC GCCGGAGAAA 
TGAAAGAGAT GTTGAACTGA GAGTTTTTTC CAAGATTCGG ATGATTTTTC 
ATATGATTGG TTGCTTTGGT TTTGTAGTTG TGGAGTTCCT TGGGAATGTG 
ACCTTGTTGC AGCGATTACC TAGTTCTTCT TTGAAGAGAA TAGCTGAAGT 
TGTTCTCTTC AAACGTTATG GTCAGTGATT CTGGGATTTT G

AT4G00500.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G49050.1); Has 561 Blast hits to 561 proteins in 134 species: Archae - 0; Bacteria - 2; Metazoa - 171; Fungi - 76; Plants - 213; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00500.2

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G49050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00520.2

Model type: Protein coding
Short Description: Acyl-CoA thioesterase family protein
Computational Description: Acyl-CoA thioesterase family protein; FUNCTIONS IN: acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT1G01710.1); Has 3429 Blast hits to 3402 proteins in 976 species: Archae - 0; Bacteria - 1910; Metazoa - 393; Fungi - 300; Plants - 65; Viruses - 0; Other Eukaryotes - 761 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00520.3

Model type: Protein coding
Short Description: Acyl-CoA thioesterase family protein
Computational Description: Acyl-CoA thioesterase family protein; FUNCTIONS IN: acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT1G01710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR