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GT19758

CSHL Arabidopsis genetrap mutant lines

Original: GT19758

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19758

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT19758 - 5-prime edge 
    GGGGGGGGGG GGGGGGGGCG GGGCGGGGGG GGGGGGGGGG GGGGGGGGGG 
    GGGGGGGGGG GGGGAGGGGG GGGGGGGGGG GGGGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20855425 [Map]; Strand: c
      • AT3G56210.5 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G56210.2 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G56210.4 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G56210.1 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19758 - 5-prime edge 
    AGAACATCGA CAAAGGAAGA CGACGAAGAA GATTTCGAGC TTCGACAAAT 
    CATGCGGATT CTTACTGCTC GCATAGCTAA CGTAATTACC CAAAATTCTT 
    CATCTGAAAT TTCCTCTCTT TACCCGTTTA TAAGATTTTC CTTGTCTTTC 
    TCTTCATCAA TGGGTTTAAC GGGTCGTTAC CGATTCTTCT GGAATCTGAA 
    GTAAAATTTG CAGCATTTTT GCAGGGCACG AAACGCGAAT CCTCGATCTC 
    GAAATTTCTT CTCTCTCGAC TAGAAGAAAG GTGCCTCCTT TTTTCCTTTT 
    GTCTTTTTTT CAACAAAGAC TATAAT

AT3G56210.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G56210.2

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G56210.4

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G56210.5

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024).
Link
InterPro Scan - TAIR