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GT19777

CSHL Arabidopsis genetrap mutant lines

Original: GT19777

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19777

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18454770 [Map]; Strand: c
      • AT5G45530.1 - [+] show detail - Protein of unknown function (DUF594)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT19777 - 5-prime edge 
    TGATGACCGA GAATTCAGCA AGATTATATC GGACTACATG ATGTATTTGT 
    TCATAATGCG ACCGAAGCTA ATGTCGGAAG TGGCGGGAAT CGGGACTATA 
    CGGTTTAGAG ATACTAAAGC TGAAGCTGAG AGGTTTTTCA AAGGACGGCA 
    AATCAAGGAC TTGAGAGATA TGAAAAGAGC GAGTGAGACG GTTTTATTGG 
    TTAGTAACGA TATTGAGCCG ATACTTGTGA AGGGAGATCG AAGCAAGTCG 
    GTTCTTTTCG ATGCGAGTAT GTTGGCGAAA GAGCTTCAGA ATTTGAAAGA 
    GAGTAGTAAT GAAGATGGGA AATGGAGAGT GCTG

AT5G45530.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF594)
Computational Description
Protein of unknown function (DUF594); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF594 (InterPro:IPR007658); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF594) (TAIR:AT5G45470.1); Has 1338 Blast hits to 867 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR