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Mutant Lines
GT19784

GT19784

CSHL Arabidopsis genetrap mutant lines

Original: GT19784

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19784

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 1175769 [Map]; Strand: c
- AT4G02660.1 - [+] show detail - Beige/BEACH domain ;WD domain, G-beta repeat protein
  Distance: -1448; Region: intergenic
- AT4G02670.1 - [+] show detail - indeterminate(ID)-domain 12
  Distance: 421; Region: intergenic

TGACGAATGT GTCCGCTCAA AGCCAGCTTA TTTGATTGTG ATAGATACTA 
TACAAGTATA TAATCTTCTT TCATCATATC CACGTTACAT GTATACATCA 
TGTAATATGC ACTTTTGTCT TCTGAATATA TATATTGCCA ATCTTATACA 
CATTGAGAAA TACATATTCA TCTCACTCCA CCATTGGCAA TAGGTGTCGA 
CAAACATATT TATTGTTGTT CTGATTGTTG TAAACAAGTT TCTATCGTAA 
TCACTAATCA GTGACAAGGA GCTTATACTA TTGATGGTCA TTTATGTTGC 
CACTATGGCA TTAGTAACGA ACACTAACAT GTATGTATCA TTTTCATACT 
GTGATGAATA GTCGCTATAC CAATCACAAT TAATTTAGTG ACAAATCATT 
ACAATCTTAT GGTTTTTTTT AATAGACGGT TTAATTACGT ACCACAAAAT 
CAAAAGGAAC TGAAAACACA TAAAGATATG AGGGTGAGGA GGAATCAAAT 
AAAAAAGATA TTATATAGAA AACTACGAGG AATAATATAA AGTAGAAAAG 
ATTAAAGAAA CGAATTAGGT CAAAGAGCTT GTTGATGAGG ACACGCATGA 
ACATGCGAAC ACTTTAAAAC CAAAAAACGA AAACAAAAAC AAGAACATGC 
GACCACTAAA AAGTTAAAA

AT4G02660.1

Model type: Protein coding
Short Description: Beige/BEACH domain ;WD domain, G-beta repeat protein
Computational Description: Beige/BEACH domain ;WD domain, G-beta repeat protein; FUNCTIONS IN: binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Beige/BEACH domain ;WD domain, G-beta repeat protein (TAIR:AT1G03060.1); Has 7684 Blast hits to 5756 proteins in 390 species: Archae - 8; Bacteria - 1306; Metazoa - 3489; Fungi - 1068; Plants - 719; Viruses - 0; Other Eukaryotes - 1094 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G02670.1

Model type: Protein coding
Short Description: indeterminate(ID)-domain 12
Computational Description: indeterminate(ID)-domain 12 (IDD12); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: shoot apex, embryo, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 45871 Blast hits to 18418 proteins in 241 species: Archae - 0; Bacteria - 0; Metazoa - 43560; Fungi - 264; Plants - 729; Viruses - 2; Other Eukaryotes - 1316 (source: NCBI BLink).
Link: InterPro Scan - TAIR