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GT19795

CSHL Arabidopsis genetrap mutant lines

Original: GT19795

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19795

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24392924 [Map]; Strand: c
      • AT1G65610.1 - [+] show detail - Six-hairpin glycosidases superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT19795 - 5-prime edge 
    CCCTGCAACC GGACTACGCC AAAAAGCTCA AAAAAGGCGC AGAAACTCTA 
    TATCCCTTCT TCAGAAGCAA GTCCAGACGC AAGCGCTACT CGGACGGACA 
    ACCAACGGCT CAAGCTTTCT ACAATTCAAC AAGTATGTTC GACGAGTTCA 
    TGTGGGCTGG TGCATGGCTT TACTACGCCA CTGGAAACAA GACTTACATA 
    CAATTCGCCA CCACACCGAG TGTACCTCAA ACTGCTAAAG CTTTTGCTAA 
    TCGACCCGAG TTAATGGTAC CGAGCTGGAA TAACAAATTA CCTGGAGCAA 
    TGTTGTTGAT GACTCGGTAT AGATTGTTCT TGAACCCTGG TTTCCCTTAC 
    GAAAACATGC TCAATAGGTA CCATAACGCT ACTGGTATCA CCATGTGTGC 
    TTATCTCAAG CA

AT1G65610.1

Model type
Protein coding
Short Description
Six-hairpin glycosidases superfamily protein
Computational Description
KORRIGAN 2 (KOR2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A1 (TAIR:AT5G49720.1); Has 1630 Blast hits to 1606 proteins in 228 species: Archae - 2; Bacteria - 483; Metazoa - 181; Fungi - 17; Plants - 907; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Link
InterPro Scan - TAIR