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GT19811

CSHL Arabidopsis genetrap mutant lines

Original: GT19811

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19811

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6704652 [Map]; Strand: w
      • AT4G10925.3 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: -7; Region: promoter
      • AT4G10925.1 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: -49; Region: promoter
      • AT4G10925.2 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: -30; Region: promoter
    Flanking Genome Sequence: GT19811 - 5-prime edge 
    TCCATCCTAC TTTATCCCTG CAACTCCGTA ACTGACCATC GCAAATGTTT 
    ATCAAAATGT GTCACTGTAG GAAATAGCCT CAAGTTTCAA GGGTATTATA 
    GTCATTGCAC ATGTATGTTT ATCCAAGTGC GTCAGAGTCA CTATAGAAAA 
    CAGATACGTC GTCGTTTAAC AATTTTCAAA AATATAAAGA AATGCGGTCA 
    GGTTAGGCCC AATAGGCATT TTAAGAATTT CATTGCTTTG AGCCTTTGAC 
    CCAAACAAAC TATCATCATC TTCTTTTACA TTTAGCTTCT AAGTTTACTA 
    GTTCAGTTTA ATAATCACAG GGACAAAAAA GTATGGAACT AAAACAAAAT 
    ATATCATTTT CATCTCTAAA TATTTTTTCA AA

AT4G10925.1

Model type
Protein coding
Short Description
Nuclear transport factor 2 (NTF2) family protein
Computational Description
Nuclear transport factor 2 (NTF2) family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G23960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G10925.2

Model type
Protein coding
Short Description
Nuclear transport factor 2 (NTF2) family protein
Computational Description
Nuclear transport factor 2 (NTF2) family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G23960.1); Has 202 Blast hits to 202 proteins in 57 species: Archae - 0; Bacteria - 78; Metazoa - 1; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G10925.3

Model type
Protein coding
Short Description
Nuclear transport factor 2 (NTF2) family protein
Computational Description
Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G23960.1).
Link
InterPro Scan - TAIR