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GT19813

CSHL Arabidopsis genetrap mutant lines

Original: GT19813

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19813

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3254157 [Map]; Strand: w
      • AT5G10340.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT19813 - 5-prime edge 
    GTGTCCTTAT ATGATCCTTG TGCTCGTCAA CAAGATCCTA GCATAAGCAG 
    CTTTGAAGCT CTGAGAACGT TTTTGGTGGA GTCATCTGCA GCTTCTGTTC 
    AGATCCCTAC TCCTTGGGAG GACAAGTTGT ACTTCGTTTG CAATACTAGC 
    TGTGATGGTC TGATATGCCT CTTCAGTTTC TATGAACTGC CGAGTATTGT 
    CGTCAATCCC ACCACTCGAT GGCATCGAAC TTTCCCTAAA TGCAACTATC 
    AACTAGTCGC TGCCGACAAG GGTGAGAGAC ACGAGTGCTT TAAAGTCGCA 
    TGCCCTACTC CTGGATTTGG CAAAGACAAA ATCAGTGGCA CTTACAAGCC 
    AGTTTGGTTA TATAATTCCG CTGAGTTAGA CCTAAATGAC AAGCCTACTA 
    CTTGTGAAGT TTTCGATTTT GCCACCTACG CTTGGAGGGA CGATTTCCCC 
    ACGTCCCCTC ATCAGATTCA

AT5G10340.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR