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GT19856

CSHL Arabidopsis genetrap mutant lines

Original: GT19856

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19856

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1516686 [Map]; Strand: c
      • AT3G05320.1 - [+] show detail - O-fucosyltransferase family protein
        Distance: -1791; Region: intergenic
      • AT3G05327.1 - [+] show detail - Cyclin family protein
        Distance: 733; Region: intergenic
    Flanking Genome Sequence: GT19856 - 5-prime edge
    CATTTCTACA CCCAATAGTA TCACATACAT TAATACTCCT ACAAGCTTGT 
    GTGAAAGGCA GGGATGAAAG TAGGATGGGA AAATCCCGTA CCGACCGTTA
    TCGTAAGTTG CATGTTGCAA AGGCATTAAT GAAAAGTGTG ATACTCTTTC
    TGACAACCAT TTAAAGATTA AAATACATGC ATGGTTATTC TTCTCTCTCA
    ACAAGANATG GTATAACACT ATTAAACTGT TTAGCTTCTT TGGTGGCCAA
    TATGAATCTG AAACTGATTG ACATTAATGC AACAAACAGA AAAATTGGGA
    AACCGTCTCT TTTGACTTTC GACAATCTAA TGGTAATGCC TTAACTCGTT
    GACTTATGAA TGAGACAAGC A

AT3G05320.1

Model type
Protein coding
Short Description
O-fucosyltransferase family protein
Computational Description
O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G05327.1

Model type
Protein coding
Short Description
Cyclin family protein
Computational Description
Cyclin family protein; CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922); BEST Arabidopsis thaliana protein match is: cyclin p4;1 (TAIR:AT2G44740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR