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GT19868

CSHL Arabidopsis genetrap mutant lines

Original: GT19868

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19868

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 349933 [Map]; Strand: c
      • AT2G01810.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT19868 - 5-prime edge 
    GGGTGATATA TAATCTCCTG CAACCAAGCT GACTTTTTGC GCAAGCTAGG 
    GCTAGCGAAT GCTGAGGTTG CGTTCCTTGG ATCTCAAGCT ATCTCCATAA 
    CACATGTTAC AG

AT2G01810.1

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G66170.1); Has 637 Blast hits to 622 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 216; Plants - 250; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR