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GT19937

CSHL Arabidopsis genetrap mutant lines

Original: GT19937

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19937

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 708393 [Map]; Strand: c
      • AT4G01660.1 - [+] show detail - ABC transporter 1
        Distance: -151; Region: promoter
    Flanking Genome Sequence: GT19937 - 5-prime edge
    ATAACCAGAA ACTGCTCCTC CAAGGTTTCT AGTTTCGGCC GGCCCAATTA 
    GCCTATTCCA TTTTTATTGT CACCATATAA GGCCCATTGG GCTATAAAGG
    AGTTTTACGA GTAGCTTCCT TAACCATTTG TGATGTTTTG TTGAATTGCT
    CCCGTAACAG GTAGTTTTAA TTGTCCAAAG TATATATTTC ATCAATTTAT
    GATGTTTTTT TTGTGTGTGA TAAGAATGTA ATGTTATTAA GGTTTAGGAA
    ACGACATCAG TAAGATCCTA GATACATTGT CTCATGCCAA AAAGGTAAGA
    AATATGGAAG CATAGACAAT CGAGAATTAG ATCATCACTA CATCTTTAAG
    CGGTGAAGCT TTAGACAAAG CTATGAAATG AACGCGATAA AAAAATTCAT
    CTAAGCAAAA CATGGCAAGA AACAAGAGTT ATAAGAGAAA AAGAAACTTT
    AAAATGATTA TAAAACGAAG CGGAAGTCCC TTCAACGTGA GCCCCAACCT
    AAGAAGGAGT GGAGCAACAC GAGCTAAAAG CGGCAAGCAA TGATGTTTTC
    TACCAACATT CTCGATCAGT AGCATGGACA AACCAACTTC TTACCCTTCG
    AACTACCATA CTAAAACCTC CCAAATACCA TGAAACGATT CCAAAAAACC
    TCGACGAAAT TGAATCTTTC AAAAGCCATA CTAACAATTT ATGATGTTAA
    TCACCAAACA TATTTAAAGA TCATGTATTT ATCACCAATC TTTGGCTGGT
    CTAACTCAAA CATTA

AT4G01660.1

Model type
Protein coding
Short Description
ABC transporter 1
Curator Summary
Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant
Computational Description
ABC transporter 1 (ABC1); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2); Has 8616 Blast hits to 8614 proteins in 1786 species: Archae - 122; Bacteria - 4355; Metazoa - 377; Fungi - 416; Plants - 667; Viruses - 9; Other Eukaryotes - 2670 (source: NCBI BLink).
Link
InterPro Scan - TAIR